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Series GSE124123 Query DataSets for GSE124123
Status Public on Mar 01, 2019
Title Expansion of bacteriophages during disease worsens intestinal inflammation and colitis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purified phage was used to prevent tumor growth in a mouse model of bacteria aggravated-colorectal cancer. Composite E. coli phage or vehicle control was added to the drinking water of specific pathogen free (SPF) APCmin mice and animals were colonized with E.coli NC101. APCmin mice displayed no overall difference in the number of tumors that formed within the small intestine, however colonization with E. coli NC101 accelerated the growth of tumors resulting in a significant increase in large tumor formation. Importantly, bacteriophage treatment of AIEC colonized APCmin animals significantly reduced E. coli colonization.
 
Overall design 4 week old APCmin heterozygous mice were given a cocktail of 3 E. coli phage in drinking water for 4 weeks, then challenged with E. coli NC101 via oral gavage biweekly for 2 weeks. Mice were then maintained on drinking water containing phage mixture for 2 months.
 
Contributor(s) Gogokhia L, Stephens Z
Citation(s) 30763538
Submission date Dec 19, 2018
Last update date May 31, 2019
Contact name Chris Stubben
Organization name Huntsman Cancer Institute
Department University of Utah
Street address 2000 Cir of Hope Dr
City Salt Lake City
State/province Utah
ZIP/Postal code 84103
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (9)
GSM3521202 Control_1
GSM3521203 Control_2
GSM3521204 Control_3
Relations
BioProject PRJNA510809
SRA SRP173935

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124123_11844R_Treat_vs_Control_gender.xlsx 3.8 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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