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Series GSE126737 Query DataSets for GSE126737
Status Public on Feb 19, 2022
Title The microbial taxonomic and functional compositions at the Jasper Ridge Global Change Experiment
Platform organism uncultured soil microorganism
Sample organism soil metagenome
Experiment type Other
Summary Fire is a crucial event regulating the structure and functioning of many ecosystems. Yet few studies focused on how fire affects both the taxonomic and functional diversity of soil microbial communities, along with plant diversity and soil carbon (C) and nitrogen (N) dynamics. Here, we analyze these effects for a grassland ecosystem 9-months after an experimental fire at the Jasper Ridge Global Change Experiment (JRGCE) site in California, USA. Fire altered soil microbial communities considerably, with community assembly process analysis indicating that environmental selection pressure was higher in burned sites. However, a small subset of highly connected taxa were able to withstand the disturbance. In addition, fire decreased the relative abundances of most genes associated with C degradation and N cycling, implicating a slow-down of microbial processes linked to soil C and N dynamics. In contrast, fire stimulated plant growth, likely enhancing plant-microbe competition for soil inorganic N. To synthesize our findings, we performed structural equation modeling, which showed that plants but not microbial communities were responsible for the significantly higher soil respiration rates in burned sites. In conclusion, fire is well-documented to considerable alter the taxonomic and functional composition of soil microorganisms, along with the ecosystem functioning, thus arousing feedback of ecosystem responses to affect global climate.
 
Overall design 64 samples were collected from burned plots at JRGCE, with 4 replicates for each treatment
 
Contributor(s) Yang S, Yang Y
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Submission date Feb 19, 2019
Last update date Feb 19, 2022
Contact name yang sihang
E-mail(s) yangsihanglear@163.com
Organization name Tsinghua University
Street address Haidian district Shuangqing road #30
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL24290 GeoChip 4.6
Samples (64)
GSM3611956 ID030: fire_rep1
GSM3611957 ID066: fire_rep2
GSM3611958 ID125: fire_rep3
Relations
BioProject PRJNA523166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126737_2_JRGCE128_SNR4p81p7_2bg_GeoChip_rawdata_fire_64.txt.gz 14.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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