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Series GSE143538 Query DataSets for GSE143538
Status Public on May 03, 2024
Title Transcriptome profile of Stage 40 Oryzias latipes (Medaka) embryos
Organism Oryzias latipes
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptomic profile of Stage 40 Oryzias latipes (Medaka) embryos wild type and KO for SEDL
 
Overall design Total RNA was extracted from n=3 SEDL Knock Out stage 40 embryos (named "KNOCKOUT") and n=3 Control stage 40 embryos (named "Ctrl")
Web link https://onlinelibrary.wiley.com/doi/10.1111/tra.12924
 
Contributor(s) De Cegli R, Guarino AM
Citation(s) 37963679
Submission date Jan 13, 2020
Last update date May 05, 2024
Contact name Rossella De Cegli
E-mail(s) decegli@tigem.it
Phone 08119230692
Organization name Tigem
Street address Via Campi Flegrei 34
City Pozzuoli
ZIP/Postal code 80078
Country Italy
 
Platforms (1)
GPL27992 Illumina NovaSeq 6000 (Oryzias latipes)
Samples (6)
GSM4261601 Medaka_Control #1
GSM4261602 Medaka_Control #2
GSM4261603 Medaka_Control #4
This SubSeries is part of SuperSeries:
GSE143540 Transcriptome profile of wildtype and SEDL knockdown Medaka embryos and Human ARPE-19 cells
Relations
BioProject PRJNA600933
SRA SRP241736

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE143538_RAW.tar 440.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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