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GEO accession:
Series GSE152613
Query DataSets for GSE152613
Status
Public on Aug 05, 2021
Title
CLAMP and Zelda function together as pioneer transcription factors to promote Drosophila zygotic genome activation
Organism
Drosophila melanogaster
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34342574
Submission date
Jun 16, 2020
Last update date
Nov 04, 2021
Contact name
Erica Larschan
E-mail(s)
erica_larschan@brown.edu
Organization name
Brown University
Department
MCB
Lab
Larschan Lab
Street address
185 meeting street, Room 368
City
Providence
State/province
Rhode island
ZIP/Postal code
02912
Country
USA
Platforms (2)
GPL17275
Illumina HiSeq 2500 (Drosophila melanogaster)
GPL21306
Illumina HiSeq 4000 (Drosophila melanogaster)
Samples (66)
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More...
GSM4618613
CLAMP-i 0-2hr #1
GSM4618614
CLAMP-i 0-2hr #2
GSM4618615
CLAMP-i 0-2hr #3
GSM4618616
MTD 0-2hr #1
GSM4618617
MTD 0-2hr #2
GSM4618618
MTD 0-2hr #3
GSM4618619
CLAMP-i 2-4hr #1
GSM4618620
CLAMP-i 2-4hr #2
GSM4618621
CLAMP-i 2-4hr #3
GSM4618622
MTD 2-4hr #1
GSM4618623
MTD 2-4hr #2
GSM4618624
MTD 2-4hr #3
GSM4618633
CLAMP_MTD_0-2_hr_1
GSM4618634
Zelda_MTD_0-2_hr_1
GSM4618635
input_MTD_0-2_hr_1
GSM4618636
CLAMP_clamp-RNAi_0-2_hr_1
GSM4618637
Zelda_clamp-RNAi_0-2_hr_1
GSM4618638
input_clamp-RNAi_0-2_hr_1
GSM4618639
CLAMP_Zelda-RNAi_0-2_hr_1
GSM4618640
Zelda_Zelda-RNAi_0-2_hr_1
GSM4618641
input_Zelda-RNAi_0-2_hr_1
GSM4618642
CLAMP_MTD_2-4_hr_1
GSM4618643
Zelda_MTD_2-4_hr_1
GSM4618644
input_MTD_2-4_hr_1
GSM4618645
CLAMP_clamp-RNAi_2-4_hr_1
GSM4618646
Zelda_clamp-RNAi_2-4_hr_1
GSM4618647
input_clamp-RNAi_2-4_hr_1
GSM4618648
CLAMP_Zelda-RNAi_2-4_hr_1
GSM4618649
Zelda_Zelda-RNAi_2-4_hr_1
GSM4618650
input_Zelda-RNAi_2-4_hr_1
GSM4618651
CLAMP_MTD_0-2_hr_2
GSM4618652
Zelda_MTD_0-2_hr_2
GSM4618653
input_MTD_0-2_hr_2
GSM4618654
CLAMP_clamp-RNAi_0-2_hr_2
GSM4618655
Zelda_clamp-RNAi_0-2_hr_2
GSM4618656
input_clamp-RNAi_0-2_hr_2
GSM4618657
CLAMP_Zelda-RNAi_0-2_hr_2
GSM4618658
input_Zelda-RNAi_0-2_hr_2
GSM4618659
Zelda_Zelda-RNAi_0-2_hr_2
GSM4618660
CLAMP_MTD_2-4_hr_2
GSM4618661
Zelda_MTD_2-4_hr_2
GSM4618662
input_MTD_2-4_hr_2
GSM4618663
CLAMP_clamp-RNAi_2-4_hr_2
GSM4618664
Zelda_clamp-RNAi_2-4_hr_2
GSM4618665
input_clamp-RNAi_2-4_hr_2
GSM4618666
CLAMP_Zelda-RNAi_2-4_hr_2
GSM4618667
input_Zelda-RNAi_2-4_hr_2
GSM4618668
Zelda_Zelda-RNAi_2-4_hr_2
GSM4618669
CLAMP_MTD_0-2_hr_3
GSM4618670
Zelda_MTD_0-2_hr_3
GSM4618671
input_MTD_0-2_hr_3
GSM4618672
CLAMP_clamp-RNAi_0-2_hr_3
GSM4618673
Zelda_clamp-RNAi_0-2_hr_3
GSM4618674
input_clamp-RNAi_0-2_hr_3
GSM4618675
CLAMP_Zelda-RNAi_0-2_hr_3
GSM4618676
input_Zelda-RNAi_0-2_hr_3
GSM4618677
Zelda_Zelda-RNAi_0-2_hr_3
GSM4618678
CLAMP_MTD_2-4_hr_3
GSM4618679
Zelda_MTD_2-4_hr_3
GSM4618680
input_MTD_2-4_hr_3
GSM4618681
CLAMP_clamp-RNAi_2-4_hr_3
GSM4618682
Zelda_clamp-RNAi_2-4_hr_3
GSM4618683
input_clamp-RNAi_2-4_hr_3
GSM4618684
CLAMP_Zelda-RNAi_2-4_hr_3
GSM4618685
Zelda_Zelda-RNAi_2-4_hr_3
GSM4618686
input_Zelda-RNAi_2-4_hr_3
This SuperSeries is composed of the following SubSeries:
GSE152596
CLAMP and Zelda function together as pioneer transcription factors to promote Drosophila zygotic genome activation [ATAC-Seq]
GSE152598
CLAMP and Zelda function together as pioneer transcription factors to promote Drosophila zygotic genome activation [ChIP-Seq]
Relations
BioProject
PRJNA639826
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE152613_RAW.tar
7.0 Mb
(http)
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TAR (of NARROWPEAK)
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