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Series GSE156388 Query DataSets for GSE156388
Status Public on Sep 22, 2021
Title RNA-Seq of HeLa cells treated with siTFIP11
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-Seq of HeLa cells treated with siTFIP11 or control siRNA to investigate the effect of TFIP11 knockdown on mRNA as part of a larger study on the function of TFIP11.
 
Overall design 3 replicates of HeLa cells treated with siTFIP11, 3 replicates of HeLa cells treated with siGL3 (control).
 
Contributor(s) Mottet D, Duchemin A, O'Grady T, Hanache S
Citation(s) 34789764
Submission date Aug 18, 2020
Last update date Nov 19, 2021
Contact name Tina M O'Grady
E-mail(s) cogrady@tulane.edu
Phone 504-988-1169
Organization name Tulane Health Sciences Center
Department Pathology
Street address 1430 Tulane Ave., SL79
City New Orleans
State/province LA
ZIP/Postal code 70112
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM4730028 HeLa siGI3_1 RNA-seq
GSM4730029 HeLa siGI3_2 RNA-seq
GSM4730030 HeLa siGI3_3 RNA-seq
This SubSeries is part of SuperSeries:
GSE156390 Role of TFIP11 in U6 snRNA modification and splicing efficiency
Relations
BioProject PRJNA657755
SRA SRP277894

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156388_read_counts.tsv.gz 517.8 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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