|
| Status |
Public on May 09, 2022 |
| Title |
Genome-wide analysis of chromatin structure changes upon MyoD binding in proliferative myoblasts during the cell cycle |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We evaluated the chromatin structure around MyoD-bound genome regions during the cell cycle by chromatin immunoprecipitation sequencing.
|
| |
|
| Overall design |
We performed RNA-seq and ChIP-seq in proliferative mouse C2C12 myoblasts during three phases (G1, S, G2/M) of the cell cycle.
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| |
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| Contributor(s) |
Wu Q, Fujii T, Harada A, Tomimatsu K, Miyawaki-Kuwakado A, Maehara K, Ohkawa Y |
| Citation(s) |
33479729 |
| |
| Submission date |
Nov 11, 2020 |
| Last update date |
May 11, 2022 |
| Contact name |
Yasuyuki Ohkawa |
| E-mail(s) |
yohkawa@bioreg.kyushu-u.ac.jp
|
| Organization name |
Medical Institute of Bioregulation
|
| Lab |
Division of Transcriptomics
|
| Street address |
3-1-1 Maidashi
|
| City |
Fukuoka |
| ZIP/Postal code |
8128582 |
| Country |
Japan |
| |
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| Platforms (1) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
|
| Samples (30)
|
|
| Relations |
| BioProject |
PRJNA676168 |
| SRA |
SRP292233 |
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