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Series GSE162126 Query DataSets for GSE162126
Status Public on Nov 26, 2020
Title Transcriptomic analysis of evolved strains.
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary We develop a CRISPR-Cas assisted random mutation (CARM) technology for whole genome mutagenesis. As a proof-of-principle, CARM was applied to evolve the capacity of Saccharomyces cerevisiae to produce β-carotene. Thees files are transcriptomic analysis of finally evolutionary strain C7-143, processed evolutionary strain C3-06 and C5-63, and the original strains C0 and BY47419.
 
Overall design Transcriptomic analysis of evolved strains.
 
Contributor(s) Zhao M, Wang F, Wei D
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Submission date Nov 25, 2020
Last update date Nov 26, 2020
Contact name Ming Zhao
E-mail(s) zhaoming2222@126.com
Organization name East China University of Science and Technology
Street address 130 Meilong Road, Xuhui District
City shanghai
ZIP/Postal code 200237
Country China
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (15)
GSM4942427 BY47419_rep1
GSM4942428 BY47419_rep2
GSM4942429 BY47419_rep3
Relations
BioProject PRJNA680702
SRA SRP294119

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162126_Expression.xlsx 3.2 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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