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GEO accession:
Series GSE163793
Query DataSets for GSE163793
Status
Public on Jan 15, 2021
Title
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33472597
Submission date
Dec 23, 2020
Last update date
Jan 27, 2021
Contact name
Tracy Yamawaki
E-mail(s)
tyamawak@amgen.com
Organization name
AMGEN, INC.
Street address
1120 VETERANS BLVD.
City
SOUTH SAN FRANCISCO
State/province
California
ZIP/Postal code
94080
Country
USA
Platforms (6)
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GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
GPL24625
NextSeq 550 (Homo sapiens; Mus musculus)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
GPL25431
Illumina HiSeq 4000 (Homo sapiens; Mus musculus)
GPL25526
Illumina NovaSeq 6000 (Homo sapiens; Mus musculus)
Samples (27)
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GSM4987142
01_Chromium_3p_v2_lymphocyte_cell line_mix
GSM4987143
02_Chromium_3p_v2_lymphocyte_cell line_mix
GSM4987144
05_Chromium_5p_v1_lymphocyte_cell line_mix
GSM4987145
06_Chromium_5p_v1_lymphocyte_cell line_mix
GSM4987146
21_Chromium_3p_v3_lymphocyte_cell line_mix
GSM4987147
22_Chromium_3p_v3_lymphocyte_cell line_mix
GSM4987148
23_Chromium_3p_v3_lymphocyte_cell line_mix
GSM4987149
24_Chromium_3p_v3_lymphocyte_cell line_mix
GSM4987477
19_DropSeq_lymphocyte_cell line_mix
GSM4987478
20_DropSeq_lymphocyte_cell line_mix
GSM4987487
Jurkat
GSM4987488
TALL104
GSM4987489
EL4
GSM4987490
IVA12
GSM4987491
09_ddSEQ_lymphocyte_cell line_mix
GSM4987492
10_ddSEQ_lymphocyte_cell line_mix
GSM4987493
11_ddSEQ_lymphocyte_cell line_mix
GSM4987494
12_ddSEQ_lymphocyte_cell line_mix
GSM4987495
13_ddSEQ_lymphocyte_cell line_mix
GSM4987496
14_ddSEQ_lymphocyte_cell line_mix
GSM4987497
15_ddSEQ_lymphocyte_cell line_mix
GSM4987498
16_ddSEQ_lymphocyte_cell line_mix
GSM4987513
27_iCELL8_3pDE_lymphocyte_cell line_mix
GSM4987514
28_iCELL8_3pDE_lymphocyte_cell line_mix
GSM4987515
29_iCELL8_3pDEUMI_lymphocyte_cell line_mix
GSM5009118
PBMC_10x3'v3
GSM5009119
PBMC_10x5'v1
This SuperSeries is composed of the following SubSeries:
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GSE163781
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [10x]
GSE163785
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [DS]
GSE163787
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [bulk]
GSE163788
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [ddSEQ]
GSE163792
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [icell8]
GSE164402
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [PBMC_10X]
Relations
BioProject
PRJNA687535
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE163793_RAW.tar
1.0 Gb
(http)
(custom)
TAR (of CSV, MTX, TSV, TXT)
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