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Series GSE16778 Query DataSets for GSE16778
Status Public on Sep 21, 2010
Title Gene expression levels in immortalized B cells from members of 45 CEPH-Utah pedigrees
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We used microarrays to examine gene expression levels from members of 45 CEPH-Utah pedigrees.

Keywords: array-based gene expression
 
Overall design We measured gene expression levels in immortalized B cells from members of 45 CEPH-Utah pedigrees. For some cell lines, RNA extracts were hybridized twice, representing technical replicates. For these cell lines, we take the average signal intensity as a measure of relative abundance of a gene. These gene expression levels were then used in genome-wide linkage analyses to identify genetics determinants of gene expression.

CEL files were lost for 3 Samples GSM420949, GSM421101, and GSM421103.
 
Contributor(s) Cheung VG, Nayak RR, Wang IX, Elwyn S, Morley M, Spielman RS
Citation(s) 20856902
Submission date Jun 24, 2009
Last update date Jul 08, 2016
Contact name Renuka Nayak
Organization name HHMI, University of Pennsylvania
Street address 3516 Civic Center Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL201 [HG-Focus] Affymetrix Human HG-Focus Target Array
Samples (695)
GSM420458 baseline_45familylinkage_GM06980_rep1
GSM420459 baseline_45familylinkage_GM06981_rep1
GSM420460 baseline_45familylinkage_GM06982_rep1
Relations
BioProject PRJNA117531

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16778_RAW.tar 880.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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