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Series GSE172351 Query DataSets for GSE172351
Status Public on Apr 20, 2021
Title Transcriptome analyses of aggregating Lactiplantibacillus plantarum
Organism Lactiplantibacillus plantarum
Experiment type Expression profiling by high throughput sequencing
Summary The transcriptome of L. plantarum strains that aggregate was compared with non-aggregating strains
 
Overall design 2 aggregating strain with 2 and 3 samples. 2 non-aggregating strains with 3 samples each.
 
Contributor(s) Isenring J, Geirnaert A, Lacroix C, Stevens M
Citation(s) 34610822
Submission date Apr 19, 2021
Last update date Oct 13, 2021
Contact name Marc Stevens
E-mail(s) marc.stevens@uzh.ch
Organization name University of Zurich
Department Vetsuisse
Lab Institute for Food Safety and Hygiene
Street address Winterthurerstrasse 272
City Zürich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL30015 Illumina NovaSeq 6000 (Lactiplantibacillus plantarum)
Samples (11)
GSM5253032 6_B6_rep2
GSM5253033 6_B6_rep3
GSM5253034 EE9_t0_rep2
Relations
BioProject PRJNA723008
SRA SRP315388

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172351_Lp_genes.csv.gz 103.8 Kb (ftp)(http) CSV
GSE172351_RAW.tar 530.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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