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| Status |
Public on Jan 30, 2023 |
| Title |
Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species |
| Organisms |
Danio rerio; Xenopus tropicalis; Macaca mulatta; Homo sapiens; Sus scrofa; Mus musculus; Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We utilized single-cell RNA sequencing (scRNA-seq) to carry out comparative transcriptome analysis in various immune cells from the spleens across seven vertebrate species.
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| Overall design |
High-dimensional single-cell RNA sequencing (10X Genomics) was used to profile the transcriptomes of total immune cells isolated from seven organism spleens.
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| Contributor(s) |
Zhang B, Jiao A, Zhang C, Wang X |
| Citation(s) |
36871615 |
| |
| Submission date |
Oct 19, 2021 |
| Last update date |
Mar 21, 2023 |
| Contact name |
Cangang Zhang |
| E-mail(s) |
cg.zhang20195028@stu.xjtu.edu.cn
|
| Phone |
13636810556
|
| Organization name |
xian jiaotong university
|
| Street address |
Yanta district, xi 'an city, shaanxi province
|
| City |
xian |
| State/province |
State... |
| ZIP/Postal code |
710000 |
| Country |
China |
| |
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| Platforms (7)
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| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
| GPL24995 |
Illumina NovaSeq 6000 (Danio rerio) |
| GPL25947 |
Illumina NovaSeq 6000 (Rattus norvegicus) |
| GPL26351 |
Illumina NovaSeq 6000 (Sus scrofa) |
| GPL27943 |
Illumina NovaSeq 6000 (Macaca mulatta) |
| GPL30018 |
Illumina NovaSeq 6000 (Xenopus tropicalis) |
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| Samples (7)
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| Relations |
| BioProject |
PRJNA772751 |
| SRA |
SRP342163 |
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