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Series GSE188650 Query DataSets for GSE188650
Status Public on Jul 07, 2022
Title [RNP-MaP] U1 snRNP regulates recruitment of early spliceosomal components by disrupting SRSF1-pre-mRNA interactions
Organism Human adenovirus 2
Experiment type Other
Summary Please refer to the summary of the Superseries.
 
Overall design Examination of in vitro protein binding sites by RNP-MaP
Please note that each processed datafile for RNP_MaP is obtained from two samples (reagent-treated and vehicle-treated) and is linked to the corresponding reagent-treated sample records.
 
Contributor(s) Saha K, Ghosh G
Citation(s) 35871302
Submission date Nov 11, 2021
Last update date Aug 12, 2022
Contact name Kaushik Saha
E-mail(s) ksaha79@googlemail.com
Organization name University of California San Diego
Department Chemistry and Biochemistry
Lab NSB 3325A
Street address 9500 Gilman Drive
City La Jolla
State/province CA
ZIP/Postal code 92093-0375
Country USA
 
Platforms (1)
GPL30034 Illumina MiSeq (Human adenovirus 2)
Samples (6)
GSM5687626 RNP_AdML + U1 snRNP + DMSO
GSM5687627 RNP_AdML + U1 snRNP + SDA
GSM5687628 RNP_AdML + U1 snRNP + SRSF1 + DMSO
This SubSeries is part of SuperSeries:
GSE188652 Cooperative engagement and subsequent selective displacement of SR proteins define the pre-mRNA 3D structural scaffold for early spliceosome assembly
Relations
BioProject PRJNA779795
SRA SRP345679

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188650_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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