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Series GSE188656 Query DataSets for GSE188656
Status Public on Nov 13, 2021
Title Analysis of microRNA expression in murine BMDCs activated by flagellin
Organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary MicroRNAs (miRNAs) are small non-coding RNA molecules that regulate gene expression by either translational inhibition or mRNA degradation. However, the role of miRNAs in inflammation induced by flagellin (ligand of TLR5) has not been fully determined, Here, we identified differentially expressed miRNAs in murine bone marrow-derived dendritic cells (BMDCs) between flagellin (FliC) treatment and medium alone using miRNA microarray. And we further evaluated the role of miRNAs in inflammation induced by flagellin.
 
Overall design Murine BMDCs were generated from C3H/HeJ murine bone marrow in vitro cultured in presence of rmGM-CSF and rmIL-4. The CD11c+ BMDCs were sorted using anti-CD11c-coated magnetic beads with the auto-MACS system. The purified BMDCs were stimulated with 100 ng/mL flagellin (FliC) or medium for 24 h. The differentially expressed miRNAs between flagellin-stimulated group and mock group were screened using miRNA microarray. Three flagellin-stimulated samples and two mock samples were included in the experiment.
 
Contributor(s) Kang X, Pan Z
Citation(s) 35222370
Submission date Nov 12, 2021
Last update date Mar 03, 2022
Contact name Xilong Kang
E-mail(s) xlkang@yzu.edu.cn
Phone +8651487971136
Organization name Yangzhou University
Street address 48 East Wenhui Road
City Yangzhou
State/province Jiangsu
ZIP/Postal code 225009
Country China
 
Platforms (1)
GPL19324 Agilent-038112 mouse miRNA microarray, Release 18.0 (miRNA ID version)
Samples (5)
GSM5687698 BMDCs_FliC_24h_rep1
GSM5687699 BMDCs_FliC_24h_rep2
GSM5687700 BMDCs_FliC_24h_rep3
Relations
BioProject PRJNA779869

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188656_RAW.tar 35.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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