|
| Status |
Public on Jan 18, 2023 |
| Title |
Congenital heart disease associated bronchopulmonary dysplasia and its underlying mechanisms |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We reported the RNAseq analyses of lungs tissues in neonatal SD rats with or without reduced pulmonary blood flow(RPF). RPF was induced by causing the supravalvular pulmonary stenosis through pulmonary artery banding within 24 hours postnatally (P1). RNAseq analyses of the upper lobe of the right lung tissues was generated at P14 from 5 sham-operated rats and 5 PAB rats. The results revealed that there were 2013 differentially expressed genes between PAB and sham group at P7, among which 936 were upregulated and 1077 were downregulated. GO and KEGG pathway analysis of downregulation of DEGs indicated that abundantly enriched terms of cell migration and metabolism.
|
| |
|
| Overall design |
RNAseq analyses of the upper lobe of the right lungs tissues in PAB and sham-operated neonatal rats.
|
| |
|
| Contributor(s) |
Li D, Chen L, Ye L, Sun Q |
| Citation(s) |
36631871, 36472329 |
| |
| Submission date |
Apr 26, 2022 |
| Last update date |
May 31, 2023 |
| Contact name |
Debao Li |
| E-mail(s) |
lidebao@sjtu.edu.cn
|
| Phone |
19956578645
|
| Organization name |
Shanghai Children's Medical Center
|
| Street address |
No. 1678 Dongfang Road, Tangqiao Street
|
| City |
Shanghai |
| ZIP/Postal code |
200127 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL25947 |
Illumina NovaSeq 6000 (Rattus norvegicus) |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA832120 |
Less...
More...