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GEO accession:
Series GSE217594
Query DataSets for GSE217594
Status
Public on Apr 10, 2023
Title
Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration
Organism
Ambystoma mexicanum
Experiment type
Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Nov 09, 2022
Last update date
Oct 04, 2023
Contact name
Jingkui Wang
E-mail(s)
jingkui.wang@imp.ac.at
Organization name
Research Institute of Molecular Pathology (IMP)
Lab
Tanaka
Street address
Campus-Vienna-Biocenter 1
City
Vienna
ZIP/Postal code
1030
Country
Austria
Platforms (3)
GPL22800
Illumina HiSeq 2500 (Ambystoma mexicanum)
GPL27159
Illumina NovaSeq 6000 (Ambystoma mexicanum)
GPL32846
NextSeq 2000 (Ambystoma mexicanum)
Samples (113)
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More...
GSM6722098
CT_IgG_mUA_163647
GSM6722099
CT_H3K4me3_mUA_163649
GSM6722100
CT_H3K27me3_mUA_163650
GSM6722101
CT_H3K4me1_mLA_163652
GSM6722102
CT_H3K4me3_mLA_163653
GSM6722103
CT_H3K27me3_mLA_163654
GSM6722104
CT_H3K4me3_mHand_163657
GSM6722105
CT_H3K27me3_mHand_163658
GSM6722106
CT_IgG_mUA_164156
GSM6722107
CT_IgG_mLA_164157
GSM6722108
CT_IgG_mHand_164158
GSM6722109
CT_H3K4me3_mUA_177599
GSM6722110
CT_H3K4me3_mLA_177600
GSM6722111
CT_H3K4me3_mHand_177601
GSM6722112
CT_H3K4me1_mUA_182553
GSM6722113
CT_H3K4me1_mHand_182555
GSM6722114
CT_IgG_mUA_185739
GSM6722115
CT_H3K4me1_mUA_185740
GSM6722116
CT_H3K4me3_mUA_185741
GSM6722117
CT_H3K27me3_mUA_185742
GSM6722118
CT_IgG_BL5days_185744
GSM6722119
CT_H3K4me1_BL5days_185745
GSM6722120
CT_H3K4me3_BL5days_185746
GSM6722121
CT_H3K27me3_BL5days_185747
GSM6722122
CT_IgG_BL9days_185749
GSM6722123
CT_H3K4me1_BL9days_185750
GSM6722124
CT_H3K4me3_BL9days_185751
GSM6722125
CT_H3K27me3_BL9days_185753
GSM6722126
CT_IgG_BL13days.prox_185754
GSM6722127
CT_H3K4me1_BL13days.prox_185755
GSM6722128
CT_H3K4me3_BL13days.prox_185756
GSM6722129
CT_H3K27me3_BL13days.prox_185757
GSM6722130
CT_IgG_BL13days.dist_185759
GSM6722131
CT_H3K4me1_BL13days.dist_185760
GSM6722132
CT_H3K4me3_BL13days.dist_185761
GSM6722133
CT_H3K27me3_BL13days.dist_185762
GSM6722134
CT_IgG_mUA_185764
GSM6722135
CT_H3K4me1_mUA_185765
GSM6722136
CT_H3K4me3_mUA_185766
GSM6722137
CT_H3K27me3_mUA_185767
GSM6722138
CT_IgG_BL5days_185769
GSM6722139
CT_H3K4me1_BL5days_185770
GSM6722140
CT_H3K4me3_BL5days_185771
GSM6722141
CT_H3K27me3_BL5days_185772
GSM6722142
CT_IgG_BL9days_185774
GSM6722143
CT_H3K4me1_BL9days_185775
GSM6722144
CT_H3K4me3_BL9days_185776
GSM6722145
CT_H3K27me3_BL9days_185777
GSM6722146
CT_IgG_BL13days.prox_185779
GSM6722147
CT_H3K4me1_BL13days.prox_185780
GSM6722148
CT_H3K4me3_BL13days.prox_185781
GSM6722149
CT_H3K27me3_BL13days.prox_185782
GSM6722150
CT_IgG_BL13days.dist_185784
GSM6722151
CT_H3K4me1_BL13days.dist_185785
GSM6722152
CT_H3K4me3_BL13days.dist_185788
GSM6722153
CT_H3K27me3_BL13days.dist_185790
GSM6722154
CT_IgG_mUA_186059
GSM6722155
CT_H3K4me1_mUA_186060
GSM6722156
CT_H3K27me3_mUA_186061
GSM6722157
CT_H3K4me1_mLA_186063
GSM6722158
CT_H3K27me3_mLA_186064
GSM6722159
CT_H3K4me1_mHand_186066
GSM6722160
CT_H3K27me3_mHand_186067
GSM6722161
atac_HEAD_161519
GSM6722162
atac_Mature_Hand_161522
GSM6722163
atac_Mature_Hand_102659
GSM6722164
atac_Mature_Hand_74940
GSM6722165
atac_Mature_LA_161521
GSM6722166
atac_Mature_LA_102657
GSM6722167
atac_Mature_LA_74939
GSM6722168
atac_Mature_UA_166903
GSM6722169
atac_Mature_UA_102655
GSM6722170
atac_Mature_UA_136159
GSM6722171
atac_Mature_UA_136164
GSM6722172
atac_Mature_UA_74938
GSM6722173
atac_HEAD_177595
GSM6722174
atac_HEAD_177597
GSM6722175
atac_Mature_LA_177596
GSM6722176
atac_Mature_LA_177598
GSM6722177
atac_BL_UA_13days_distal_136168
GSM6722178
atac_BL_UA_13days_distal_136163
GSM6722179
atac_BL_UA_13days_proximal_136162
GSM6722180
atac_BL_UA_13days_proximal_136167
GSM6722181
atac_BL_UA_5days_136160
GSM6722182
atac_BL_UA_5days_136165
GSM6722183
atac_BL_UA_5days_89542
GSM6722184
atac_BL_UA_5days_89543
GSM6722185
atac_BL_UA_9days_136161
GSM6722186
atac_BL_UA_9days_136166
GSM6722187
atac_Embryo_Stage40_137329
GSM6722188
atac_Embryo_Stage40_137330
GSM6722189
atac_Embryo_Stage40_93324
GSM6722190
atac_Embryo_Stage40_93325
GSM6722191
atac_Embryo_Stage44_distal_93321
GSM6722192
atac_Embryo_Stage44_distal_93323
GSM6722193
atac_Embryo_Stage44_proximal_93320
GSM6722194
atac_Embryo_Stage44_proximal_93322
GSM6722195
smartseq2_Mature_Hand_161517
GSM6722196
smartseq2_Mature_Hand_161514
GSM6722197
smartseq2_Mature_UA_161512
GSM6722198
smartseq2_Mature_UA_161516
GSM6722199
smartseq2_Mature_UA_136143
GSM6722200
smartseq2_Mature_UA_136149
GSM6722201
smartseq2_BL_UA_5days_136144
GSM6722202
smartseq2_BL_UA_5days_136150
GSM6722203
smartseq2_BL_UA_9days_136145
GSM6722204
smartseq2_BL_UA_9days_136151
GSM6722205
smartseq2_BL_UA_13days_distal_136147
GSM6722206
smartseq2_BL_UA_13days_distal_136153
GSM6722207
smartseq2_BL_UA_13days_proximal_136146
GSM6722208
smartseq2_BL_UA_13days_proximal_136152
GSM7818612
smartseq2_Mature_LA_161517
GSM7818613
smartseq2_Mature_LA_161514
This SuperSeries is composed of the following SubSeries:
GSE217591
Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [Cut&Tag]
GSE217592
Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [ATAC-seq]
GSE217593
Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [RNA-seq]
Relations
BioProject
PRJNA899785
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE217594_RAW.tar
36.6 Gb
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TAR (of BW)
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