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Series GSE218484 Query DataSets for GSE218484
Status Public on Aug 23, 2023
Title The E2 SUMO-conjugating enzyme UBE2I is essential for chromatin dynamics and transcriptional silencing in mouse oocytes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In mammals, meiotically competent oocytes develop cyclically during ovarian folliculogenesis. During their development, prophase I arrested oocytes are highly  transcriptionally active in preparation for the resumption of meiosis  and early stages of embryogenesis prior to the maternal to zygotic transition. Defective oocyte development during folliculogenesis leads to meiotic defects, aneuploidy, follicular atresia, or non-viable embryos. SUMOylation, a dynamic post-translational protein modification, is essential for oocyte development during folliculogenesis and to regulate meiotic maturation in mice. We generated a novel oocyte-specific knockout of Ube2i, the sole SUMO E2 ligase, to test its role growing ovarian follicles using Zp3-cre. Ube2i Zp3-cre+ female mice are sterile with oocytes with defects in meiotic progression but not meiotic resumption. Importantly, fully grown oocytes do not silence transcription and prematurely activate the zygotic transcriptional program. This work uncovers unknown functions of UBE2i as a key orchestrator of chromatin and transcriptional regulation in oocytes.
 
Overall design We performed RNA-sequencing analysis on 17 individual control and 17 individual Ube2i cKO oocytes
 
Contributor(s) Pangas SA, Briley SM, Jiang P
Citation(s) 37676777
Submission date Nov 21, 2022
Last update date Feb 08, 2024
Contact name Peixin Jiang
Organization name Baylor College of Medicine
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (34)
GSM6746008 Control GV oocyte 1 [6292a_SB2]
GSM6746009 Control GV oocyte 2 [6292b_SB3]
GSM6746010 Control GV oocyte 3 [6295a_SB6]
Relations
BioProject PRJNA903918

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Supplementary file Size Download File type/resource
GSE218484_normalized_all_counts.csv.gz 3.0 Mb (ftp)(http) CSV
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