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Series GSE227420 Query DataSets for GSE227420
Status Public on Mar 28, 2024
Title An innate immunity against Xanthomonas oryzae activated by ATM-mediated host DSB damage response in rice
Organism Oryza sativa
Experiment type Expression profiling by high throughput sequencing
Summary We examined the transcriptional data in rice leaves of TOP6A3 overexpressed line (TOP6A3-OE1) with WT (K3) plants under normal growth.
 
Overall design RNA-seq
 
Contributor(s) Xu Z, Xu P, Qiu J, Yang M, Kou Y, Essemine J, Wang X, Xiang Y, Chen W
Citation(s) 38160258, 38504521
Submission date Mar 15, 2023
Last update date Aug 26, 2024
Contact name Mingnan Qu
E-mail(s) qmn2021@gmail.com
Phone 13022108559
Organization name Guangzhou city academy of agricultural sciences
Street address Pazhou Dadao Rd, 17-19
City Guangzhou
State/province China
ZIP/Postal code 510000
Country China
 
Platforms (1)
GPL19290 Illumina HiSeq 2500 (Oryza sativa)
Samples (4)
GSM7100208 K3, CK1
GSM7100209 K3, CK2
GSM7100210 6A3, CK1
Relations
BioProject PRJNA945017

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227420_K3+6A3.xlsx 4.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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