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| Status |
Public on Jul 21, 2011 |
| Title |
Gene expression during first day of collagen gel culture of rat aortic rings |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Angiogenesis in collagen gel cultures of rat aorta begins with neovessels sprouting from the aortic explant within the first three days of culture.
We used microarrays to detail the pattern of gene expression underlying initial 24 hours of growth, prior to the sprouting of visible neovessles, and identified distinct classes of up-regulated genes during this process.
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| Overall design |
Either freshly harvested aortic rings, representing day 0, or collagen gel cultures of rat aorta were grown in serum free medium and used to prepare total RNA.
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| Contributor(s) |
Aplin AC, Nicosia RF |
| Citation(s) |
21372301 |
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| Submission date |
Jul 26, 2010 |
| Last update date |
Nov 06, 2013 |
| Contact name |
Alfred C Aplin |
| E-mail(s) |
aaplin@u.washington.edu
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| Phone |
206-277-1528
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| Organization name |
University of Washington
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| Department |
Pathology
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| Street address |
Box 357470 HSB-UW
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| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98195 |
| Country |
USA |
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| Platforms (1) |
| GPL6247 |
[RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA131571 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE23152_RAW.tar |
23.7 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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