|
| Status |
Public on Jun 13, 2023 |
| Title |
Dietary intake of xylose impacts the transcriptome and proteome of tissues involved in xylose metabolism in swine |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We investigated the transcriptomics and proteomics profiling between different xylose supplementation diets (0% xylose-free vs. 8% xylose (8 g D-xylose/kg)) in swine.
We used RNA-seq and proteomics data from kidney, jejunum, liver, and muscle from two replicates of 12 crossbred gilts each to provide 24 animals (12 per dietary 100 treatment; L337 × Camborough, PIC Inc., Hendersonville, TN).
|
| |
|
| Overall design |
We performed differential gene expression and proteomics analyses between different xylose diets using 24 swine animals (12 control vs. 12 xylose treatment) from 4 tissues (kidney, jejunum, liver, and muscle)
|
| Web link |
https://www.frontiersin.org/articles/10.3389/fanim.2023.1179773/full
|
| |
|
| Contributor(s) |
Huntley NF, De Souza MM, Schulte MD, Beiki H, de Lima AO, Jantzi AE, Lonergan SM, Lonergan EH, Patience JF, Koltes JE |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 22, 2023 |
| Last update date |
Sep 20, 2023 |
| Contact name |
James Koltes |
| Organization name |
Iowa State University
|
| Department |
Department of Animal Science
|
| Street address |
1221 Kildee Hall
|
| City |
Ames |
| State/province |
Iowa |
| ZIP/Postal code |
50011-3150 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24486 |
Illumina HiSeq 3000 (Sus scrofa) |
|
| Samples (96)
|
|
| Relations |
| BioProject |
PRJNA975080 |
Less...
More...