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Series GSE235861 Query DataSets for GSE235861
Status Public on Jul 07, 2023
Title The subacromial bursa regulates rotator cuff tendon healing and is a target to augment tendon repair.
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Rotator cuff injuries result in over 500,000 surgeries performed annually, an alarmingly high number of which fail. These procedures typically involve repair of the injured tendon and removal of the subacromial bursa. However, recent identification of a resident population of mesenchymal stem cells and inflammatory responsiveness of the bursa to tendinopathy indicate an unexplored biological role of the bursa in the context of rotator cuff disease. Therefore, we aimed to understand the clinical relevance of bursa-tendon crosstalk, characterize the biologic role of the bursa within the shoulder, and test the therapeutic potential for targeting the bursa. Proteomic profiling of patient bursa and tendon samples demonstrated that the bursa is activated by tendon injury. Using a rat to model rotator cuff injury and repair, tenotomy-activated bursa protected the intact tendon adjacent to the injured tendon and maintained the morphology of the underlying bone. The bursa also promoted an early inflammatory response in the injured tendon, initiating key players in wound healing. In vivo results were supported by targeted organ culture studies of the bursa. To examine the potential to therapeutically target the bursa, dexamethasone was delivered to the bursa, prompting a shift in cellular signaling towards modulating inflammation in the healing tendon. In conclusion, contrary to current clinical practice, the bursa should be retained to the greatest extent possible and provides a new therapeutically target for improving tendon healing outcomes.
 
Overall design This study identified the role of the subacromial bursa in rotator cuff response to injury via the retention or removal of the subacromial bursa in rotator cuff injury setting. Rat rotator cuff tendon injury (supraspinatus tenotomy) were performed with or without subacromial bursectomy (removal of the subacromial bursa). The resulting bilateral supraspinatus tendons and remaining subacromial bursa were dissected for RNA-sequencing at 3 or 14 days post-operation. There were n=6 replicates per timepoint. Control bursa and supraspinatus tendon from non-operative rats were included for a non-injurious control; supraspinatus tendon samples were also internally controlled per rat.
Web link https://www.science.org/doi/10.1126/scitranslmed.add8273
 
Contributor(s) Marshall BP, Ashinsky BG, Ferrer XE, Kunes JA, Innis AC, Luzzi AJ, Forrester LA, Burt KG, Lee AJ, Song L, Lisiewski LE, Soon RK, Hung CT, Levine WN, Kovacevic D, Thomopoulos S
Citation(s) 38657023
Submission date Jun 26, 2023
Last update date Apr 24, 2024
Contact name Stavros Thomopoulos
E-mail(s) sat2@columbia.edu
Organization name Columbia University
Lab Carroll Laboratories for Orthopedic Surgery
Street address 650 W 168 ST
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL25947 Illumina NovaSeq 6000 (Rattus norvegicus)
Samples (46)
GSM7510847 Bursa Control, rep 1
GSM7510848 Bursa Control, rep 2
GSM7510849 Bursa Control, rep 3
Relations
BioProject PRJNA987719

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235861_DESeq2_kallisto_SB011_SB014_SB017_SB020_SB023_SB026_vs_SB002_SB004_SB006_SB008_SB010-DEG_list.csv.gz 981.1 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB011_SB014_SB017_SB020_SB023_SB026_vs_SB013_SB016_SB019_SB022_SB025_SB028-DEG_list.csv.gz 872.0 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB012_SB015_SB018_SB021_SB024_SB027_vs_SB001_SB003_SB005_SB007_SB009-DEG_list.csv.gz 972.2 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB013_SB016_SB019_SB022_SB025_SB028_vs_SB002_SB004_SB006_SB008_SB010-DEG_list.csv.gz 980.0 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB029_SB032_SB035_SB038_SB041_SB044_vs_SB002_SB004_SB006_SB008_SB010-DEG_list.csv.gz 978.1 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB029_SB032_SB035_SB038_SB041_SB044_vs_SB011_SB014_SB017_SB020_SB023_SB026-DEG_list.csv.gz 974.1 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB029_SB032_SB035_SB038_SB041_SB044_vs_SB031_SB034_SB037_SB040_SB043_SB046-DEG_list.csv.gz 892.5 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB030_SB033_SB036_SB039_SB042_SB045_vs_SB001_SB003_SB005_SB007_SB009-DEG_list.csv.gz 982.1 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB030_SB033_SB036_SB039_SB042_SB045_vs_SB012_SB015_SB018_SB021_SB024_SB027-DEG_list.csv.gz 992.1 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB031_SB034_SB037_SB040_SB043_SB046_vs_SB002_SB004_SB006_SB008_SB010-DEG_list.csv.gz 983.7 Kb (ftp)(http) CSV
GSE235861_DESeq2_kallisto_SB031_SB034_SB037_SB040_SB043_SB046_vs_SB013_SB016_SB019_SB022_SB025_SB028-DEG_list.csv.gz 974.7 Kb (ftp)(http) CSV
GSE235861_est_counts_transcipts_kallisto.txt.gz 1.6 Mb (ftp)(http) TXT
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