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Series GSE236748 Query DataSets for GSE236748
Status Public on Jan 31, 2024
Title Mechanism of RUNX1 targeted AKT3 regulated alveolar procoagulant fibrinolytic inhibition in ARDS
Organism Rattus norvegicus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Acute respiratory distress syndrome (ARDS) is an acute inflammatory lung injury and one of the serious life-threatening forms of respiratory failure. Alveolar procoagulation and fibrinolytic inhibition constitute the core part of the pathophysiology of ARDS, RUNX1 plays an important role in this pathogenesis. We screened for AKT3, the target gene of RUNX1, using CHIP-seq and verified its binding target by a dual luciferase assay.
 
Overall design RLE-6TN cells were transfected with LV-RUNX1 to increase the expression level of RUNX1
We screened for AKT3, the target gene of RUNX1, using CHIP-seq and verified its binding target by a dual luciferase assay.
 
Contributor(s) Xiao C
Citation(s) 38267920
Submission date Jul 06, 2023
Last update date Jan 31, 2024
Contact name Tongjian Zhao
Organization name School of Pharmaceutical Sciences, Jilin University
Street address 1266 Fujin Road
City Changchun
ZIP/Postal code 130021
Country China
 
Platforms (1)
GPL25947 Illumina NovaSeq 6000 (Rattus norvegicus)
Samples (2)
GSM7574847 RLE-6TN cells, ChIP-1-Input
GSM7574848 RLE-6TN cells, ChIP-1-IP
Relations
BioProject PRJNA992179

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Supplementary file Size Download File type/resource
GSE236748_Peak_Annotations.xlsx 3.6 Mb (ftp)(http) XLSX
GSE236748_Promoter_Peak_Annotation.xlsx 49.9 Kb (ftp)(http) XLSX
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