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| Status |
Public on Dec 31, 2023 |
| Title |
Transcriptional decay profiling of Neurospora crassa |
| Organism |
Neurospora crassa |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Codon optimality mediated decay(COMD) is a conserved phenomenon from yeast to human. Our data suggests that COMD alson exist in neurospora crass. We resort thiolutin(inhibitor for transcription) to treat cells in different time point and transcriptionally profiled them to get the landscape of transpcriptional decay profiling.
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| Overall design |
24h cultured cell under constant light were treat with thiolutin(12μg/ml), then cell were harvested from time point 0min, 20min, 40min, 60min.
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| Contributor(s) |
Li Z, Wang Z, Dang Y |
| Citation missing |
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| |
| Submission date |
Jul 24, 2023 |
| Last update date |
Jan 01, 2024 |
| Contact name |
Yunkun Dang |
| E-mail(s) |
ykdang@ynu.edu.cn
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| Organization name |
Yunnan university
|
| Department |
School of Life Sciences
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| Lab |
Dang lab
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| Street address |
South Section, East Outer Ring Road, Chenggong District
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| City |
Kunming |
| State/province |
Yunnan |
| ZIP/Postal code |
650500 |
| Country |
China |
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| Platforms (1) |
| GPL33601 |
MGISEQ-2000RS (Neurospora crassa) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA997929 |
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