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Series GSE249176 Query DataSets for GSE249176
Status Public on Mar 01, 2024
Title METTL16 deficiency attenuates apoptosis through translational control of extrinsic death receptor during nutrient deprivation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary METTL16 is a well-characterized m6A methyltransferase that has been reported to contribute to tumorigenesis in various types of cancer. However, the effect of METTL16 on tumor progression under restricted nutrient conditions, which commonly occur in tumor microenvironment, has yet to be elucidated. Herein, our study initially reported the inhibitory effect of METTL16 depletion on apoptosis under amino acid starvation conditions.
 
Overall design To investigate the potential role of METTL16 under nutrient deprivation, stable METTL16-knockdown (M16-KD) cell lines were initially constructed using classic A549 NSCLC cells, through a shRNA-based gene interference approach.
Web link https://pubmed.ncbi.nlm.nih.gov/38520913/
 
Contributor(s) Li Q, Zhang J
Citation(s) 38520913
Submission date Dec 01, 2023
Last update date Jun 22, 2024
Contact name Zhang Jun
E-mail(s) 3219030654@stu.cpu.edu.cn
Phone 15651718659
Organization name China Pharmaceutical University
Lab zhoulab
Street address longmiandadao
City nanjing
State/province jiangsu
ZIP/Postal code 211198
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM7927747 A549 shCtrl, AA starvation, ribo-seq
GSM7927748 A549 shM16, control, ribo-seq
GSM7927749 A549 shM16, AA starvation, ribo-seq
Relations
BioProject PRJNA1047606

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE249176_TE_for_each_samples.txt.gz 707.2 Kb (ftp)(http) TXT
GSE249176_raw_counts.txt.gz 878.9 Kb (ftp)(http) TXT
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Raw data are available in SRA

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