GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE257697

Query DataSets for GSE257697

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR862DMN)

Project

modENCODE

Organism

Caenorhabditis elegans

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic worms expressing hlh-11-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR862DMN/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 25, 2024

Last update date

Sep 02, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL22765

Illumina HiSeq 4000 (Caenorhabditis elegans)

Samples (2)

GSM8108391	TF ChIP-seq from whole organism (ENCLB830SJO)
GSM8108392	TF ChIP-seq from whole organism (ENCLB403ZAO)

Relations

Reanalyzed by

GSE276166

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE257697_ENCFF047SMD_optimal_IDR_thresholded_peaks_ce11.bigBed	329.8 Kb	(ftp)(http)	BIGBED
GSE257697_ENCFF207SGF_peaks_and_background_as_input_for_IDR_ce11.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE257697_ENCFF234MHY_control_normalized_signal_ce11.bigWig	9.9 Mb	(ftp)(http)	BIGWIG
GSE257697_ENCFF434VHI_optimal_IDR_thresholded_peaks_ce11.bed.gz	166.5 Kb	(ftp)(http)	BED
GSE257697_ENCFF494DLK_read-depth_normalized_signal_ce11.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE257697_ENCFF836FHG_peaks_and_background_as_input_for_IDR_ce11.bed.gz	743.3 Kb	(ftp)(http)	BED
GSE257697_ENCFF881EPM_signal_of_unique_reads_ce11.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE257697_RAW.tar	61.8 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA