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Series GSE262389 Query DataSets for GSE262389
Status Public on May 23, 2024
Title The protein moonlighting dominates the phenotypic divergence of the Sef1 transcriptional regulatory networks in yeasts
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the ChIP-seq profiling of a transcriptional factor Sef1 in Sccharomyces cerevisiae, and show that ScSef1 targets many TCA cycle and many others genes but has very limited regulatory effects to these target genes.
 
Overall design ScSef1 ChIP-seq analysis was performed from three or four biological replicates of YPD- and YPGly-grown Sef1-TAP tagged cells, using Illumina NextSeq500 sequencer.
 
Contributor(s) Hsu P, Leu J
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Submission date Mar 25, 2024
Last update date May 24, 2024
Contact name Po-Chen Hsu
E-mail(s) godshi2006@gmail.com
Organization name Academia Sinica
Department Institute of Molecular Biology
Lab N411 JYL lab
Street address 128 Academia Road, Section 2, Nankang
City Taipei
ZIP/Postal code 11529
Country Taiwan
 
Platforms (1)
GPL19756 Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (14)
GSM8164304 Input_YPD_repeat 1
GSM8164305 Input_YPD_repeat 2
GSM8164306 Input_YPD_repeat 3
Relations
BioProject PRJNA1091636

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262389_RAW.tar 173.6 Mb (http)(custom) TAR (of BIGWIG, NARROWPEAK, TXT, WIG)
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Raw data are available in SRA

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