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Series GSE264190 Query DataSets for GSE264190
Status Public on Aug 21, 2024
Title Secreted factors from M1 macrophages drive prostate cancer stem cell plasticity by upregulating NANOG, SOX2 and CD44 through NFκB signaling [LNCaP-C42B]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The inflammatory tumor microenvironment (TME) is a key driver of tumor-promoting pro-cesses. Tumor-associated macrophages are one of the main immune cell types in the TME and their increased density is related to poor prognosis in prostate cancer. Here, we investigated the influence of pro-inflammatory (M1) and immunosuppressive (M2) macrophages on pros-tate cancer lineage plasticity. Our findings reveal that M1 macrophage secreted factors up-regulate genes related to stemness while downregulating genes associated with androgen re-sponse in prostate cancer cells. The expression of cancer stem cell plasticity markers NANOG, KLF4, SOX2, OCT4 and CD44 was stimulated by the secreted factors from M1 macrophages. Moreover, AR and its target gene KLK3 were observed to be suppressed in LNCaP cells treated with secreted factors from M1 macrophages. Inhibition of NFκB signaling using the IKK16 inhibitor resulted in downregulation of NANOG, SOX2 and CD44 and cancer stem cell plasticity. Our study highlights that the secreted factors from M1 macrophages drive prostate cancer cell plasticity by upregulating the expression of cancer stem cell plasticity markers through NFκB signaling pathway.
 
Overall design To investigate the effects of secreted factors from pro-inflammatory (M1) and immunosuppressive (M2) macrophages on LNCaP-C42B prostate cancer cells, we treated LNCaP-C42B cells with conditioned medium (CM) from M0, M1 or M2 polarized THP-1 macrophages for 48 hours. We established RNA-seq for control (RPMI medium), M0 CM, M1 CM and M2 CM.
 
Contributor(s) Ketola K, Pasonen-Seppänen S, Niskanen EA, Kainulainen K
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Submission date Apr 17, 2024
Last update date Aug 21, 2024
Contact name Einari A Niskanen
E-mail(s) einari.niskanen@uef.fi
Organization name University of Eastern Finland
Department School of Medicine
Lab Biomedicine
Street address Yliopistonranta 8
City Kuopio
ZIP/Postal code 70210
Country Finland
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM8213751 RPMI 1
GSM8213752 RPMI 2
GSM8213753 RPMI 3
This SubSeries is part of SuperSeries:
GSE264191 Secreted factors from M1 macrophages drive prostate cancer stem cell plasticity by upregulating NANOG, SOX2 and CD44 through NFκB signaling
Relations
BioProject PRJNA1101428

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE264190_rawCounts.C42B_RNAseq.txt.gz 1.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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