NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE29198 Query DataSets for GSE29198
Status Public on May 11, 2011
Title The Multicopy Gene Sly Represses the Sex Chromosomes in the Male Mouse Germline after Meiosis
Organism Mus musculus
Experiment type Expression profiling by array
Summary Studies of mice with Y chromosome long arm deficiencies suggest that the male-specific region (MSYq) encodes information required for sperm differentiation and postmeiotic sex chromatin repression (PSCR). Several genes have been identified on MSYq, but because they are present in more than 40 copies each, their functions cannot be investigated using traditional gene targeting. Here, we generate transgenic mice producing small interfering RNAs that specifically target the transcripts of the MSYq-encoded multicopy gene Sly (Sycp3-like Y-linked). Microarray analyses performed on these Sly-deficient males and on MSYq-deficient males show a remarkable up-regulation of sex chromosome genes in spermatids.
 
Overall design Two sets of samples were examined: (1) Total RNA isolated from separated round spermatids of young adult males (8 weeks postpartum) with Yq deletions or shSLY targeted knockdown, compared to age- and strain-matched controls. (2) Total RNA isolated from whole testis of juvenile males (17 days post partum) with shSLY targeted knockdown, compared to age- and strain-matched controls.
 
Contributor(s) Cocquet J, Ellis PJ, Yamauchi Y, Mahadevaiah SK, Affara NA, Ward MA, Burgoyne PS
Citation(s) 19918361
Submission date May 10, 2011
Last update date Jan 16, 2019
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (12)
GSM722465 Spermatids_sh367 rep1
GSM722466 Spermatids_sh367 rep2
GSM722467 Spermatids_2_3Yqdel_rep1
Relations
BioProject PRJNA140041

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29198_RAW.tar 15.8 Mb (http)(custom) TAR
GSE29198_non-normalized.txt.gz 3.5 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap