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Series GSE31577 Query DataSets for GSE31577
Status Public on Aug 09, 2012
Title Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator
Organisms Camponotus floridanus; Harpegnathos saltator
Experiment type Methylation profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 22885060
Submission date Aug 22, 2011
Last update date May 15, 2019
Contact name Hong zhi Cao
E-mail(s) caohongzhi@genomics.cn
Phone 8675525274032
Organization name BGI-SHENZHEN
Department Bioinformatics
Street address F5, Main Building, Beishan Industrial Zone, Beishan Road, Yantian District
City Shenzhen
State/province Guangdong
ZIP/Postal code 518083
Country China
 
Platforms (4)
GPL10644 Illumina Genome Analyzer (Camponotus floridanus)
GPL10645 Illumina Genome Analyzer (Harpegnathos saltator)
GPL14137 Illumina HiSeq 2000 (Camponotus floridanus)
Samples (47)
GSM777318 CF_Q (smRNA-seq)
GSM777319 CF_VQ (smRNA-seq)
GSM777320 HS_Q (smRNA-seq)
This SuperSeries is composed of the following SubSeries:
GSE31344 smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
GSE31346 Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
GSE31576 Single base resolution methylome of two ants: Camponotus floridanus and Harpegnathos saltator
Relations
BioProject PRJNA145615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31577_RAW.tar 356.9 Mb (http)(custom) TAR (of BEDGRAPH, FA)
SRA Run SelectorHelp

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