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GEO accession:
Series GSE31577
Query DataSets for GSE31577
Status
Public on Aug 09, 2012
Title
Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator
Organisms
Camponotus floridanus
;
Harpegnathos saltator
Experiment type
Methylation profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
22885060
Submission date
Aug 22, 2011
Last update date
May 15, 2019
Contact name
Hong zhi Cao
E-mail(s)
caohongzhi@genomics.cn
Phone
8675525274032
Organization name
BGI-SHENZHEN
Department
Bioinformatics
Street address
F5, Main Building, Beishan Industrial Zone, Beishan Road, Yantian District
City
Shenzhen
State/province
Guangdong
ZIP/Postal code
518083
Country
China
Platforms (4)
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More...
GPL10644
Illumina Genome Analyzer (Camponotus floridanus)
GPL10645
Illumina Genome Analyzer (Harpegnathos saltator)
GPL14137
Illumina HiSeq 2000 (Camponotus floridanus)
GPL14138
Illumina HiSeq 2000 (Harpegnathos saltator)
Samples (47)
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GSM777318
CF_Q (smRNA-seq)
GSM777319
CF_VQ (smRNA-seq)
GSM777320
HS_Q (smRNA-seq)
GSM777321
HS_VQ (smRNA-seq)
GSM777322
CF_Q (RNA-seq)
GSM777323
CF_VQ (RNA-seq)
GSM777324
HS_Q (RNA-seq)
GSM777325
HS_VQ (RNA-seq)
GSM783831
CF Egg replicate 1 (GA)
GSM783832
CF Egg replicate 2 (GA)
GSM783833
CF Egg replicate 2 (HiSeq)
GSM783834
CF Major replicate 1 (GA)
GSM783835
CF Major replicate 2 (GA)
GSM783836
CF Major replicate 2 (HiSeq)
GSM783837
CF Minor replicate 1 (GA)
GSM783838
CF Minor replicate 2 (GA)
GSM783839
CF Minor replicate 2 (HiSeq)
GSM783840
CF Queen replicate 1 (GA)
GSM783841
CF Queen replicate 2 (HiSeq)
GSM783842
CF virginQueen replicate 1 (GA)
GSM783843
CF virginQueen replicate 2 (HiSeq)
GSM783844
CF control (GA)
GSM783845
CF larva replicate 1 (GA)
GSM783846
CF larva replicate 2 (HiSeq)
GSM783847
CF male replicate 1 (GA)
GSM783848
CF male replicate 2 (GA)
GSM783849
CF male replicate 2 (HiSeq)
GSM783850
HS Larva replicate 1 (GA)
GSM783851
HS Larva replicate 1 (HiSeq)
GSM783852
HS Larva replicate 2 (GA)
GSM783886
HS Larva replicate 2 (HiSeq)
GSM783887
HS Queen replicate 1 (GA)
GSM783888
HS Queen replicate 1 (HiSeq)
GSM783889
HS Queen replicate 2 (HiSeq)
GSM783890
HS virginQueen replicate 1 (GA)
GSM783891
HS virginQueen replicate 1 (HiSeq)
GSM783892
HS virginQueen replicate2 (HiSeq)
GSM783893
HS control (GA)
GSM783894
HS egg replicate 1 (GA)
GSM783895
HS egg replicate 2 (HiSeq)
GSM783896
HS gamergater replicate 1 (GA)
GSM783897
HS gamergater replicate 2 (HiSeq)
GSM783898
HS male replicate 1 (GA)
GSM783899
HS male replicate 2 (HiSeq)
GSM783900
HS worker replicate1 (GA)
GSM783901
HS worker replicate 2 (GA)
GSM783902
HS worker replicate 2 (HiSeq)
This SuperSeries is composed of the following SubSeries:
GSE31344
smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
GSE31346
Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
GSE31576
Single base resolution methylome of two ants: Camponotus floridanus and Harpegnathos saltator
Relations
BioProject
PRJNA145615
Download family
Format
SOFT formatted family file(s)
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Supplementary file
Size
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File type/resource
GSE31577_RAW.tar
356.9 Mb
(http)
(custom)
TAR (of BEDGRAPH, FA)
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