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GEO accession:
Series GSE31724
Query DataSets for GSE31724
Status
Public on Sep 20, 2011
Title
ENCODE SUNY RNA Binding Protein GeneST Data for various cell lines
Project
ENCODE
Organism
Homo sapiens
Experiment type
Expression profiling by array
Summary
For data usage terms and conditions, please refer to
http://www.genome.gov/27528022
and
http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Web link
http://www.ncbi.nlm.nih.gov/geo/info/ENCODE.html
Citation missing
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BioProject
PRJNA30709
Submission date
Aug 29, 2011
Last update date
Jul 26, 2018
Contact name
Frank Doyle
Organization name
UAlbany CNSE
Department
Nanobiology
Lab
Tenenbaum
Street address
257 Fuller Rd
City
Albany
State/province
NY
ZIP/Postal code
12203
Country
USA
Platforms (1)
GPL6244
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (72)
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GSM787537
GM12878 Total RNA Rep1
GSM787538
GM12878 Total RNA Rep2
GSM787539
GM12878 Total RNA Rep3
GSM787540
GM12878 Negative Control Rep1
GSM787541
GM12878 Negative Control Rep2
GSM787542
GM12878 Negative Control Rep3
GSM787543
GM12878 ELAVL1 RIP RNA Rep1
GSM787544
GM12878 ELAVL1 RIP RNA Rep2
GSM787545
GM12878 ELAVL1 RIP RNA Rep3
GSM787546
GM12878 PABPC1 RIP RNA Rep1
GSM787547
GM12878 PABPC1 RIP RNA Rep2
GSM787548
GM12878 PABPC1 RIP RNA Rep3
GSM787549
GM12878 CELF1 RIP RNA Rep1
GSM787550
GM12878 CELF1 RIP RNA Rep2
GSM787551
GM12878 CELF1 RIP RNA Rep3
GSM787552
GM12878 SLBP RIP RNA Rep1
GSM787553
GM12878 SLBP RIP RNA Rep2
GSM787554
GM12878 SLBP RIP RNA Rep3
GSM787555
GM12878 IGF2BP1 RIP RNA Rep1
GSM787556
GM12878 IGF2BP1 RIP RNA Rep2
GSM787557
GM12878 IGF2BP1 RIP RNA Rep3
GSM787558
K562 Total RNA Rep1
GSM787559
K562 Total RNA Rep2
GSM787560
K562 Total RNA Rep3
GSM787561
K562 Negative Control Rep1
GSM787562
K562 Negative Control Rep2
GSM787563
K562 Negative Control Rep3
GSM787564
K562 ELAVL1 RIP RNA Rep1
GSM787565
K562 ELAVL1 RIP RNA Rep2
GSM787566
K562 ELAVL1 RIP RNA Rep3
GSM787567
K562 PABPC1 RIP RNA Rep1
GSM787568
K562 PABPC1 RIP RNA Rep2
GSM787569
K562 PABPC1 RIP RNA Rep3
GSM787570
K562 CELF1 RIP RNA Rep1
GSM787571
K562 CELF1 RIP RNA Rep2
GSM787572
K562 CELF1 RIP RNA Rep3
GSM787573
K562 SLBP RIP RNA Rep1
GSM787574
K562 SLBP RIP RNA Rep2
GSM787575
K562 SLBP RIP RNA Rep3
GSM787596
HeLaS3 Total RNA Rep1
GSM787597
HeLaS3 Total RNA Rep2
GSM787598
HeLaS3 Total RNA Rep3
GSM787599
HeLaS3 Negative Control Rep1
GSM787600
HeLaS3 Negative Control Rep2
GSM787601
HeLaS3 Negative Control Rep3
GSM787602
HeLaS3 ELAVL1 RIP RNA Rep1
GSM787603
HeLaS3 ELAVL1 RIP RNA Rep2
GSM787604
HeLaS3 ELAVL1 RIP RNA Rep3
GSM787605
HeLaS3 PABPC1 RIP RNA Rep1
GSM787606
HeLaS3 PABPC1 RIP RNA Rep2
GSM787607
HeLaS3 PABPC1 RIP RNA Rep3
GSM787608
HepG2 Total RNA Rep1
GSM787609
HepG2 Total RNA Rep2
GSM787610
HepG2 Total RNA Rep3
GSM787611
HepG2 Negative Control Rep1
GSM787612
HepG2 Negative Control Rep2
GSM787613
HepG2 Negative Control Rep3
GSM787614
HepG2 ELAVL1 RIP RNA Rep1
GSM787615
HepG2 ELAVL1 RIP RNA Rep2
GSM787616
HepG2 ELAVL1 RIP RNA Rep3
GSM787617
HepG2 PABPC1 RIP RNA Rep1
GSM787618
HepG2 PABPC1 RIP RNA Rep2
GSM787619
HepG2 PABPC1 RIP RNA Rep3
GSM787620
H1ESC Total RNA Rep1
GSM787621
H1ESC Total RNA Rep2
GSM787622
H1ESC Total RNA Rep3
GSM787623
H1ESC Negative Control Rep1
GSM787624
H1ESC Negative Control Rep2
GSM787625
H1ESC Negative Control Rep3
GSM787626
H1ESC ELAVL1 RIP RNA Rep1
GSM787627
H1ESC ELAVL1 RIP RNA Rep2
GSM787628
H1ESC ELAVL1 RIP RNA Rep3
This SuperSeries is composed of the following SubSeries:
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More...
GSE31716
ENCODE SUNY RNA Binding Protein GeneST Data for GM12878
GSE31717
ENCODE SUNY RNA Binding Protein GeneST Data for K562
GSE31719
ENCODE SUNY RNA Binding Protein GeneST Data for HeLaS3
GSE31720
ENCODE SUNY RNA Binding Protein GeneST Data for HepG2
GSE31721
ENCODE SUNY RNA Binding Protein GeneST Data for H1ESC
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE31724_RAW.tar
298.7 Mb
(http)
(custom)
TAR (of BROADPEAK, CEL)
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