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Series GSE36605 Query DataSets for GSE36605
Status Public on Oct 14, 2012
Title Transcriptional profiling of cumulus cells differentiation throughout oocyte competence acquisition in the bovine ovarian follicles.
Organism Bos taurus
Experiment type Expression profiling by array
Summary Somatic cells surrounding the oocyte were sampled at the following stages: developmentally incompetent or poorly competent prophase I oocytes (NC1 oocytes), developmentally competent prophase I oocytes (C1 oocytes), and developmentally competent metaphase II oocytes (C2 oocytes).
NC1 cumulus cells (CC) were sampled from immature calf oocytes, C1 samples from immature cow oocytes, and C2 samples from in vivo matured cow oocytes.
 
Overall design Global transcriptional profiling was performed using cumulus cells collected from bovine ovarian follicles during in vivo oocyte developmental competence acquisition. Cumulus cells were collected at 3 stages: early stage follicles (prophase I arrested oocytes, meiotically competent but developmentally incompetent, n=6), late stage follicles (prophase I arrested oocytes, meiotically competent and developmentally competent, n=6) and ovulatory follicles collected by ovum pick-up (OPU) in vivo (metaphase II arrested oocytes, developmentally fully competent, n=5).
 
Contributor(s) Charlier C, Uzbekova S, Bobe J, Chesnel F
Citation(s) 23083410
Submission date Mar 19, 2012
Last update date Oct 28, 2012
Contact name Julien Bobe
E-mail(s) Julien.Bobe@rennes.inra.fr
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platforms (1)
GPL9712 Agilent-015354 Bovine Oligo Microarray (4x44K) (Probe Name version)
Samples (17)
GSM897434 Calf_Imm_53
GSM897435 Calf_Imm_56
GSM897436 Calf_Imm_52
This SubSeries is part of SuperSeries:
GSE36617 Contribution of molecular actors from somatic origin to oocyte developmental competence acquisition, lessons from evolution
Relations
BioProject PRJNA155649

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36605_Cow_Normalized_data.txt.gz 2.1 Mb (ftp)(http) TXT
GSE36605_RAW.tar 109.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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