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Series GSE41462 Query DataSets for GSE41462
Status Public on Oct 10, 2012
Title Antisense exon profiling across human, mouse, and rat
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Experiment type Expression profiling by array
Summary Transcription profiling of antisense transcripts of 10 tissues each from human, mouse, and rat.
 
Overall design We profiled the antisense transcription level of 10 tissues each from human, mouse, and rat. Only Affymetrix core probesets were used. Two technical replicates per sample. Reference for protocol: Ge, X., Rubinstein, W.S., Jung, Y.C., and Wu, Q. (2008). Genome-wide analysis of antisense transcription with Affymetrix exon array. BMC Genomics 9, 27.
 
Citation(s) 23577827
Submission date Oct 10, 2012
Last update date Feb 18, 2019
Contact name Maurice Ling
E-mail(s) maurice.ling@sdstate.edu
Organization name South Dakota State University
Department Mathematics and Statistics
Street address Box 2220
City Brookings
ZIP/Postal code 57007
Country USA
 
Platforms (6)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL5188 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (120)
GSM1016883 Human Brain antisense 1 (exon)
GSM1016884 Human Brain antisense 2 (exon)
GSM1016885 Human Colon antisense 1 (exon)
This SubSeries is part of SuperSeries:
GSE41409 Sense and antisense exon profiling across human, mouse, and rat
Relations
BioProject PRJNA177583

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41462_RAW.tar 2.4 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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