|
| Status |
Public on Nov 21, 2012 |
| Title |
Expression analysis of RNAi mediated ALPPL2 knockdown in ALPPL2 expressing Panc-1 cells (Panc-1+ve) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Analysis of differentially expressing genes in whole genome wide analysis of ALPPL2 expressing Panc-1 cells (Panc-1+ve) via siRNA mediated knockdown of ALPPL2
Panc-1 +ve and Panc-1-ve cell lines were generated from Panc-1 cell line based upon its hetergenous binding to aptamer SQ2. Detailed procedure of generation of these cell lines are described in Pooja Dua, Hye Suk Kang, Seung-Mo Hong, Ming-Sound Tsao, Soyoun Kim, and Dong-ki Lee. 2012 Alkaline Phosphatase ALPPL2 is a novel pancreatic carcinoma-associated protein. Cancer Research
|
| |
|
| Overall design |
A four chip study using total RNA recovered from Panc-1+ve cells transfected with siALPPL2-2, siALPPL2-3, siGFP control and Lipofectamine 2000 treatament . Each chip measures 45,033 genes with three 60 mer probe pairs per target.
|
| |
|
| Contributor(s) |
Dua P, Lee D |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 20, 2012 |
| Last update date |
Jul 29, 2013 |
| Contact name |
pooja Dua |
| E-mail(s) |
pujaceyran@gmail.com
|
| Organization name |
Sungkyunkwan University
|
| Department |
Chemistry
|
| Lab |
BMTL
|
| Street address |
Chun-chun Dong, Jang-an Gu
|
| City |
Suwon |
| ZIP/Postal code |
440-746 |
| Country |
South Korea |
| |
|
| Platforms (1) |
| GPL10191 |
NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE42429 |
Alkaline Phosphatase ALPPL2 is a novel pancreatic carcinoma-associated protein |
|
| Relations |
| BioProject |
PRJNA181949 |
Less...
More...