NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE43798 Query DataSets for GSE43798
Status Public on Jan 13, 2014
Title Microarray of cardiac biventricle from PGC-1a-/-bf/f/MerCre mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary The following abstract from the submitted manuscript describes the major findings of this work.
The metabolic development of high energy-utilizing organs such as the heart involves mitochondrial proliferation at birth followed by a maturation process during the postnatal period. Conditional gene targeting was used in mice to explore the role of the PPARgamma coactivator 1 (PGC-1) coactivators during postnatal development and in adult heart. Marked mitochondrial derangements were observed in hearts of PGC-1a/b-deficient mice during the postnatal period, including fragmentation and elongation associated with the development of a lethal cardiomyopathy. The expression of multiple genes involved in mitochondrial fusion and fission was downregulated in hearts of PGC-1a/b-deficient mice. PGC-la was shown to activate transcription of the mitofusin 1 (Mfn1) gene by coactivating the estrogen-related receptor a (ERRa) upon a highly conserved element. Surprisingly, PGC-1a/b deficiency did not alter cardiac function or general mitochondrial density and myocyte distribution in adult heart. However, transcriptional profiling and mitochondrial function studies demonstrated that the PGC-1 coactivators are required for full respiratory capacity and high level expression of nuclear- and mitochondrial-encoded genes involved in mitochondrial energy transduction and oxidative phosphorylation pathways in adult heart. These results unveil distinct developmental stage-specific transcriptional programs involved in the maturation and maintenance of mitochondria.
 
Overall design RNA from five PGC-1a-/- and five PGC-1a-/-bf/f/MerCre mice was analyzed.
 
Contributor(s) Lai L, Martin O, Kelly D
Citation(s) 24366168
Submission date Jan 28, 2013
Last update date Mar 04, 2019
Contact name Ola Martin
E-mail(s) omartin@burnham.org
Phone 407-745-2000
Organization name Sanford-Burnham Medical Research Institute
Lab Dr. Dan Kelly
Street address 6400 Sanger Rd
City Orlando
State/province FL
ZIP/Postal code 32827
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (10)
GSM1071418 PGC-1a-/- rep1
GSM1071419 PGC-1a-/- rep2
GSM1071420 PGC-1a-/- rep3
Relations
BioProject PRJNA187450

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43798_RAW.tar 43.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap