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| Status |
Public on Oct 18, 2013 |
| Title |
Rice gene expression using Agilent custom 8X60K Microarray |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
We designed an array based on the release 7 of Michigan State University (MSU) rice genome annotation database (http://rice.plantbiology.msu.edu). The array was used for investigating the expression divergence and regulation between two contrasting rice genotypes under high salinity stress.
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| Overall design |
The expression analysis was carried out using 14-day old whole seedlings from both japonica and indica rice lines. Two samples from NaCl treatment (0h and 8h) for each line were collected for the analysis. Two biological replicates were carried out for both control and NaCl treatments, resulting in a dataset of 8 microarrays.
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| Contributor(s) |
Jiang S, Ma A, Ramamoorthy R, Ramachandran S |
| Citation(s) |
24121498 |
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| Submission date |
Jun 28, 2013 |
| Last update date |
Dec 04, 2013 |
| Contact name |
Shu-Ye Jiang |
| Organization name |
Temasek Life Sciences Laboratory, National University of Singapore
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| Street address |
1 Research Link
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| City |
Singapore |
| ZIP/Postal code |
117604 |
| Country |
Singapore |
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| Platforms (1) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA209939 |
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