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| Status |
Public on Aug 29, 2014 |
| Title |
Transcriptional comparison of cynomolgus macaques (Macaca fascicularis) following infection with Lassa or Lujo viruses |
| Platform organism |
Macaca mulatta |
| Sample organism |
Macaca fascicularis |
| Experiment type |
Expression profiling by array
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| Summary |
Microarray analysis of PBMC from cynomolgus macaques collected longitudinally over the course of infection with Lassa-Josiah, Lassa-Z132, Lassa-SorombaR, or Lujo viruses (n=3 animals/infection condition).
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| Overall design |
3 macaques from each group were infected intramuscularly with 10^4 PFU of Lassa-Josiah, Lassa-Z132, Lassa-SorombaR, or Lujo viruses. PBMC were collected at days 1, 4, 7, 10, 13, and 29 (for surviving animals). We performed microarray analysis on PBMC samples using Agilent rhesus macaque arrays on all samples, as well as on PBMC from 3 uninfected animals for use as a control.
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| Contributor(s) |
Rasmussen A, Tchitchek N, Katze M, Safronetz D, Feldmann H |
| Citation(s) |
25520505 |
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| Submission date |
Aug 13, 2013 |
| Last update date |
Aug 12, 2017 |
| Contact name |
Michael Katze |
| E-mail(s) |
data@viromics.washington.edu
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| Organization name |
University of Washington
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| Department |
Microbiology
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| Lab |
Michael G. Katze, Ph.D
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| Street address |
Rosen Building 960 Republican St.
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| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109-4325 |
| Country |
USA |
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| Platforms (1) |
| GPL14569 |
Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) |
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| Samples (61)
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| Relations |
| BioProject |
PRJNA215072 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE49838_RAW.tar |
406.5 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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