NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE53534 Query DataSets for GSE53534
Status Public on Aug 01, 2014
Title Genome-wide characterization of light-regulated genes in Neurospora crassa
Organism Neurospora crassa
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq from Neurospora crassa at 5 time points of light induction, with 2 replicates for each, totalling 10 samples
 
Overall design RNA-seq from Neurospora crassa at 5 time points of light induction, with 2 replicates for each, totalling 10 samples
 
Contributor(s) Bell-Pedersen D, Bredeweg EL, Dekhang R, Dunlap JC, Freitag M, Galagan J, Mallappa C, Peterson M, Sachs MS, Smith KM, Wu C, Yang F, Zhang Y, Zucker J
Citation(s) 25053707, 27856696
Submission date Dec 20, 2013
Last update date Jul 15, 2019
Contact name Kristina M Smith
E-mail(s) smitkris@science.oregonstate.edu
Organization name Oregon State University
Department Biochemisty and Biophysics
Lab Freitag
Street address ALS2011
City Corvallis
State/province OR
ZIP/Postal code 97331
Country USA
 
Platforms (1)
GPL16164 Illumina HiSeq 2000 (Neurospora crassa)
Samples (10)
GSM1295595 Dark replicate 1
GSM1295596 15 min replicate 1
GSM1295597 60 min replicate 1
Relations
BioProject PRJNA232306
SRA SRP034658

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53534_RAW.tar 600.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap