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Series GSE55160 Query DataSets for GSE55160
Status Public on Sep 01, 2015
Title Epigenome signatures during gastric carcinogenesis based on next generation sequencing
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30510283, 26462176
Submission date Feb 19, 2014
Last update date May 15, 2019
Contact name Hee-jin Kim
E-mail(s) heejin@kribb.re.kr
Organization name KRIBB
Street address 125 Gwahak-ro, Yuseong-gu
City Daejeon
ZIP/Postal code 363-883
Country South Korea
 
Platforms (2)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (12)
GSM1330599 1154337-CNV-GM1
GSM1330600 1154337-CNV-GM2
GSM1330601 1154337-CNV-IM1
This SuperSeries is composed of the following SubSeries:
GSE55153 Epigenome signatures during gastric carcinogenesis based on next generation sequencing [Affymetrix]
GSE55157 Epigenome signatures during gastric carcinogenesis based on next generation sequencing analysis [MBD-Seq]
GSE55159 Epigenome signatures during gastric carcinogenesis based on next generation sequencing analysis [Bisulfite-Seq]
Relations
BioProject PRJNA238870

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55160_RAW.tar 471.5 Mb (http)(custom) TAR (of BED, CEL, CHP)
SRA Run SelectorHelp

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