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GEO accession:
Series GSE55698
Query DataSets for GSE55698
Status
Public on May 27, 2014
Title
Variant PRC1 complex dependent H2A ubiquitylation drives PRC2 recruitment and polycomb domain formation
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24856970
Submission date
Mar 07, 2014
Last update date
May 15, 2019
Contact name
Hamish W King
Organization name
Queen Mary University of London
Department
Blizard Institute
Street address
4 Newark St
City
London
ZIP/Postal code
E1 2AT
Country
United Kingdom
Platforms (1)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
Samples (41)
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GSM1272788
KDM2Bfl/fl_Input
GSM1272789
KDM2Bfl/fl_KDM2B_untreated_rep1
GSM1272790
KDM2Bfl/fl_KDM2B_untreated_rep2
GSM1272791
KDM2Bfl/fl_KDM2B_untreated_rep3
GSM1272792
KDM2Bfl/fl_KDM2B_treated_rep1
GSM1272793
KDM2Bfl/fl_KDM2B_treated_rep2
GSM1272794
KDM2Bfl/fl_KDM2B_treated_rep3
GSM1272795
KDM2Bfl/fl_RING1B_untreated_rep1
GSM1272796
KDM2Bfl/fl_RING1B_untreated_rep2
GSM1272797
KDM2Bfl/fl_RING1B_untreated_rep3
GSM1272798
KDM2Bfl/fl_RING1B_treated_rep1
GSM1272799
KDM2Bfl/fl_RING1B_treated_rep2
GSM1272800
KDM2Bfl/fl_RING1B_treated_rep3
GSM1272801
KDM2Bfl/fl_SUZ12_untreated_rep1
GSM1272802
KDM2Bfl/fl_SUZ12_untreated_rep2
GSM1272803
KDM2Bfl/fl_SUZ12_treated_rep1
GSM1272804
KDM2Bfl/fl_SUZ12_treated_rep2
GSM1272805
KDM2Bfl/fl_RNAseq_untreated_rep1
GSM1272806
KDM2Bfl/fl_RNAseq_untreated_rep2
GSM1272807
KDM2Bfl/fl_RNAseq_untreated_rep3
GSM1272808
KDM2Bfl/fl_RNAseq_treated_rep1
GSM1272809
KDM2Bfl/fl_RNAseq_treated_rep2
GSM1272810
KDM2Bfl/fl_RNAseq_treated_rep3
GSM1341937
RING1A/B_cKO_Input_rep1
GSM1341938
RING1A/B_cKO_Input_rep2
GSM1341939
RING1A/B_cKO_RING1B_untreated_rep1
GSM1341940
RING1A/B_cKO_RING1B_untreated_rep2
GSM1341941
RING1A/B_cKO_RING1B_treated_rep1
GSM1341942
RING1A/B_cKO_RING1B_treated_rep2
GSM1341943
RING1A/B_cKO_SUZ12_untreated_rep1
GSM1341944
RING1A/B_cKO_SUZ12_untreated_rep2
GSM1341945
RING1A/B_cKO_SUZ12_treated_rep1
GSM1341946
RING1A/B_cKO_SUZ12_treated_rep2
GSM1341947
RING1A/B_cKO_EZH2_untreated_rep1
GSM1341948
RING1A/B_cKO_EZH2_untreated_rep2
GSM1341949
RING1A/B_cKO_EZH2_treated_rep1
GSM1341950
RING1A/B_cKO_EZH2_treated_rep2
GSM1341951
RING1A/B_cKO_H3K27me3_untreated_rep1
GSM1341952
RING1A/B_cKO_H3K27me3_untreated_rep2
GSM1341953
RING1A/B_cKO_H3K27me3_treated_rep1
GSM1341954
RING1A/B_cKO_H3K27me3_treated_rep2
This SuperSeries is composed of the following SubSeries:
GSE52619
Deletion of KDM2B DNA-binding domain affects RING1B and SUZ12 occupancy
GSE55697
Deletion of RING1A/B and loss of H2AK119ub1 affects PRC2 occupancy and H3K27me3 genome-wide
Relations
BioProject
PRJNA240568
Download family
Format
SOFT formatted family file(s)
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MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE55698_RAW.tar
3.8 Mb
(http)
(custom)
TAR (of TXT)
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