|
| Status |
Public on Dec 31, 2016 |
| Title |
Short Read Sequencing Data of the Transcriptome of the Rheumatoid Arthritis Rat Model Treated with Acupuncture or Placebo [tissue 1] |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the application of Illumina HiSeq 2000 sequencing technology for high-throughput profiling of the transcriptome of the rheumatoid arthritis rat model induced by collegen with acupuncture and placebo treatments, at time points before, 1 hour and 34 days after.
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| |
|
| Overall design |
10 rats in total: 2 replicates before treatments (RA_0); 2 replicates receiving acpuncture at 1 hour (AP_1h); 2 replicates receiving placebo at 1 hour (PLA_1h); 2 replicates receiving acpuncture at 34 days (AP_34d); 2 replicates receiving placebo at 34 days (PLA_34d).
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| |
|
| Contributor(s) |
Nardini C, Devescovi V, Liu Y |
| Citation(s) |
28008941 |
| |
| Submission date |
May 27, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Christine Nardini |
| E-mail(s) |
xtalla@gmail.com
|
| Organization name |
CAS-MPG Partner Institute for Computational Biology
|
| Street address |
320 Yueyang Road
|
| City |
Shanghai |
| ZIP/Postal code |
200031 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL14844 |
Illumina HiSeq 2000 (Rattus norvegicus) |
|
| Samples (10)
|
| GSM1399211 |
muscle tissue 1 from RA before therapy, replicate 1 |
| GSM1399212 |
muscle tissue 1 from RA before therapy, replicate 2 |
| GSM1399213 |
muscle tissue 1 from RA AP treated after 1 hour, replicate 1 |
| GSM1399214 |
muscle tissue 1 from RA AP treated after 1 hour, replicate 2 |
| GSM1399215 |
muscle tissue 1 from RA PLA treated after 1 hour, replicate 1 |
| GSM1399216 |
muscle tissue 1 from RA PLA treated after 1 hour, replicate 2 |
| GSM1399217 |
muscle tissue 1 from RA AP treated after 34 days, replicate 1 |
| GSM1399218 |
muscle tissue 1 from RA AP treated after 34 days, replicate 2 |
| GSM1399219 |
muscle tissue 1 from RA PLA treated after 34 days, replicate 1 |
| GSM1399220 |
muscle tissue 1 from RA PLA treated after 34 days, replicate 2 |
|
| Relations |
| BioProject |
PRJNA248651 |
| SRA |
SRP042288 |
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