NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE62206 Query DataSets for GSE62206
Status Public on Oct 10, 2014
Title Whole genome methylation maps of Wild Type (WT), mutant (ddm1) and epiRILs
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Summary DNA methylation profiling in Wild Type (WT), mutant (ddm1) and epiRILs (060-098-202-260-344-480)
 
Overall design 1 biological replicate per sample - Bisulfite-seq
 
Contributor(s) Kassam M, Duvernois-Berthet E, Colot V
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 09, 2014
Last update date May 15, 2019
Contact name Vincent Colot
E-mail(s) colot@biologie.ens.fr
Organization name Institut de Biologie de l'Ecole Normale Supérieure (IBENS) Section 3
Lab Arabidopsis Epigenetics & Epigenomics A2E
Street address 46 rue d'Ulm
City PARIS CEDEX 05
ZIP/Postal code 75230
Country France
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (8)
GSM1522201 WT_seedlings
GSM1522202 ddm1_seedlings
GSM1522203 epiRIL_060
Relations
BioProject PRJNA263477
SRA SRP048800

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62206_RAW.tar 1.4 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap