|
| Status |
Public on Oct 16, 2014 |
| Title |
Transcriptome Analysis of KSHV virions produced from BCBL1 and BAC36 in 293L cells |
| Organism |
Human gammaherpesvirus 8 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The objective of this study was to identify the viral transcripts packaged into the virion particles produced from BCBL1 cells as well as virions from 293L cells containing BAC36 BACs
|
| |
|
| Overall design |
RNA from virions were extracted and analyzed by RNA sequencing
|
| |
|
| Contributor(s) |
Verma SC, Purushothaman P |
| Citation(s) |
25552714 |
| |
| Submission date |
Oct 15, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Subhash C Verma |
| E-mail(s) |
scverma@medicine.nevada.edu
|
| Phone |
775-682-6743
|
| Organization name |
University of Nevada, Reno
|
| Department |
Microbiology and Immunology
|
| Lab |
Verma Lab
|
| Street address |
1664 N Virginia Street, MS 320
|
| City |
Reno |
| State/province |
NV |
| ZIP/Postal code |
89557 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17680 |
Illumina HiSeq 2000 (Human herpesvirus 8) |
|
| Samples (3) |
| GSM1525552 |
KSHV Transcriptome packaged in virions produced from BCBL1 cells |
| GSM1525553 |
KSHV Transcriptome packaged in the virions produced from 293L with BAC36 |
| GSM1525554 |
KSHV Transcriptome in virions produced from 293L with BAC36 deleted ORF59 complemented with DsREd ORF59 |
|
| This SubSeries is part of SuperSeries: |
| GSE62344 |
Transcriptome Analysis of KSHV during de novo primary infection of human B-and endothelial-cells |
|
| Relations |
| BioProject |
PRJNA263876 |
| SRA |
SRP048930 |
