|
| Status |
Public on Dec 07, 2015 |
| Title |
Detection of chromatin accessibility in WT and SRC-2-/- mice in liver |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We futher characterized genome-wide chromatin accessibility of WT and SRC-2-/- mouse liver at CT10 through DNase-Seq. In addition,chromatin accessibility was significantly reduced in SRC-2-/- mouse liver compared to WT mice at CT10.
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| |
|
| Overall design |
DNase-Seq was carried out in WT and SRC-2-/- mice in liver at CT10 using two doses of DNaseI.
|
| |
|
| Contributor(s) |
Zhu B, York B, O'Malley BW |
| Citation(s) |
26611104, 29615789 |
| |
| Submission date |
Apr 14, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Bokai Zhu |
| E-mail(s) |
bzhu@bcm.edu
|
| Phone |
2192085319
|
| Organization name |
Baylor College of Medicine
|
| Department |
MCB
|
| Lab |
Post-doc
|
| Street address |
One Baylor Plaza, M813
|
| City |
Houston |
| State/province |
Texas |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9185 |
Illumina Genome Analyzer (Mus musculus) |
|
| Samples (4)
|
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| This SubSeries is part of SuperSeries: |
| GSE67860 |
Coactivator-Dependent Oscillation of Chromatin Accessibility Dictates Circadian Gene Amplitude through REV-ERB Loading |
|
| Relations |
| BioProject |
PRJNA281083 |
| SRA |
SRP057152 |
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