|
| Status |
Public on Mar 03, 2016 |
| Title |
RNA-seq performed on sarcomas to identify various alterations |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We validated the technological and material transfers of the CINSARC signature.
|
| |
|
| Overall design |
We performed both microarray and RNA-seq analysis and compared prognostic values based on the CINSARC classification. We measure significant metastasis-free survivals with both approaches. Additionally, depending on RNA degradation, transcriptomic analysis from FFPE blocks show similar CINSARC classification.
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| |
|
| Contributor(s) |
Lesluyes T, Pérot G, Chibon F |
| Citation(s) |
26916546, 31243333, 33946962 |
| BioProject |
PRJNA282597 |
| |
| Submission date |
Jul 20, 2015 |
| Last update date |
May 25, 2021 |
| Contact name |
Frédéric Chibon |
| Organization name |
Cancer Research Center of Toulouse
|
| Department |
Team 19 - INSERM UMR1037
|
| Lab |
Sarcoma Oncogenesis
|
| Street address |
2 avenue Hubert Curien
|
| City |
Toulouse |
| ZIP/Postal code |
31000 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (136)
|
|
| This SubSeries is part of SuperSeries: |
| GSE71121 |
Expression data (micro-array and RNA-seq, frozen tumors and FFPE blocks) from various sarcomas |
|
| Relations |
| SRA |
SRP057793 |
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