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Series GSE75458 Query DataSets for GSE75458
Status Public on Nov 29, 2018
Title MBD3 expression and DNA binding patterns are altered in a rat model of temporal lobe epilepsy
Organism Rattus norvegicus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Examine involvement of MBD3 (methyl-CpG-binding domain protein 3), a protein involved in reading DNA methylation patterns, in epileptogenesis and epilepsy.
 
Overall design Examination of MBD3 binding differences in stimulated rats compared to sham operated animals in focal stimulation model of epilepsy.
 
Contributor(s) Bednarczyk J, Dębski KJ, Bot AM, Lukasiuk K
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Submission date Nov 29, 2015
Last update date May 15, 2019
Contact name Katarzyna Lukasiuk
E-mail(s) k.lukasiuk@nencki.gov.pl
Organization name Nencki Institute of Experimental Biology Polish Academy of Sciences
Department Department of Molecular and Cellular Neurobiology
Lab Laboratory of Epileptogenesis
Street address 3 Pasteur Street
City Warsaw
ZIP/Postal code 02-093
Country Poland
 
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (9)
GSM1955427 RatID_1_MBD3
GSM1955428 RatID_2_MBD3
GSM1955429 RatID_3_MBD3
Relations
BioProject PRJNA304346
SRA SRP066750

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75458_RAW.tar 4.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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