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Series GSE84138 Query DataSets for GSE84138
Status Public on May 28, 2017
Title miR-34a and miR-34b/c suppress intestinal tumorigenesis in ApcMin/+ Mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary miR-34a and miR-34b/c genes are frequently epigenetically silenced in primary CRCs. However, the in vivo relevance of miR-34a/b/c for suppression of intestinal tumor formation has not been analyzed by genetic approaches. ApcMin/+ mice with deletion of the miR-34a and miR-34b/c genes were generated and analyzed. The mRNA expression profiles of intestinal adenomas with and without functional miR-34a/b/c genes were compared.
 
Overall design miR-34a/b/c deficient ApcMin/+ mice and wild-type ApcMin/+ mice were sacrificed at 18 weeks of age. 3 tumor RNA samples were obtained for each genotype; each tumor RNA sample represented a pool of 3 tumors isolated from the same mouse.
 
Contributor(s) Jiang L, Hermeking H
Citation(s) 28363996
Submission date Jul 07, 2016
Last update date May 15, 2019
Contact name Longchang Jiang
E-mail(s) Longchang.Jiang@med.uni-muenchen.de
Phone +49 89 2180 73724
Organization name Ludwig-Maximilians-University München
Department Institute of Pathology
Lab Experimental and Molecular Pathology
Street address Thalkirchner Strasse 36
City Munich
ZIP/Postal code 80337
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2227613 KO-1
GSM2227614 KO-2
GSM2227615 KO-3
Relations
BioProject PRJNA328138
SRA SRP078057

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84138_RAW.tar 4.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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