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Series GSE86162 Query DataSets for GSE86162
Status Public on Aug 30, 2016
Title HuMiChip2 for Strain Level Identification and Functional Profiling of Human Microbiomes
Organism human metagenome
Experiment type Other
Summary HuMiChip2 was applied to analyze perform both strain-level identification and the functional profiling of human gut microbiomes from alcoholic cirrhosis patients and healthy individuals with alcohol abuse.
 
Overall design A total of 18 individuals were recruited for the study, among whom 9 were diagnosed with alcoholic cirrhosis and 9 were healthy individuals with alcohol abuse.
 
Contributor(s) He Z, Li L
Citation(s) 27734124
Submission date Aug 29, 2016
Last update date Nov 29, 2016
Contact name Qichao Tu
E-mail(s) philloid@gmail.com
Organization name University of Oklahoma
Street address 101 David L Boren Blvd
City Norman
State/province OK
ZIP/Postal code 73019
Country USA
 
Platforms (1)
GPL22376 Agilent-061991 HumiChip2 Nov 13th 061941
Samples (18)
GSM2296243 Gut_microbiome_AB1
GSM2296244 Gut_microbiome_AB2
GSM2296245 Gut_microbiome_AB3
Relations
BioProject PRJNA340386

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86162_RAW.tar 896.5 Mb (http)(custom) TAR (of TXT)
GSE86162_processed_data.txt.gz 570.2 Kb (ftp)(http) TXT
Processed data are available on Series record

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