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Series GSE86739

Query DataSets for GSE86739

Status

Public on Oct 14, 2016

Title

ChIP-seq from hindbrain (ENCSR703TBR)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K9me3 ChIP-seq on embryonic 10.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR703TBR/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Sep 09, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21103

Illumina HiSeq 4000 (Mus musculus)

Samples (2)

GSM2308580	ChIP-seq from hindbrain (ENCLB437CQW)
GSM2308581	ChIP-seq from hindbrain (ENCLB402NEG)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE86739_ENCFF104BQA_peaks_mm10.bed.gz	2.6 Mb	(ftp)(http)	BED
GSE86739_ENCFF284ZDG_peaks_mm10.bigBed	5.7 Mb	(ftp)(http)	BIGBED
GSE86739_ENCFF321YPC_replicated_peaks_mm10.bigBed	2.2 Mb	(ftp)(http)	BIGBED
GSE86739_ENCFF672EXE_fold_change_over_control_mm10.bigWig	1.2 Gb	(ftp)(http)	BIGWIG
GSE86739_ENCFF676DCP_replicated_peaks_mm10.bed.gz	1.1 Mb	(ftp)(http)	BED
GSE86739_ENCFF995CSG_signal_p-value_mm10.bigWig	1.2 Gb	(ftp)(http)	BIGWIG
GSE86739_RAW.tar	3.2 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record