GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE89408
Query DataSets for GSE89408
Status
Public on Jun 19, 2017
Title
RNAseq study of synovial biopsies
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
Total RNA sequencing was performed on samples isolated from joint synovial biopsies from subjects with and without rheumatoid arthritis
Overall design
One biopsy sample per subject was analysed without replicates
Contributor(s)
Walsh AM
,
Guo Y
Citation(s)
28455435
,
28863153
Submission date
Nov 01, 2016
Last update date
May 15, 2019
Contact name
Alice Walsh
E-mail(s)
awalsh17@its.jnj.com
Organization name
Janssen R&D
Department
Immunology
Street address
Welsh & McKean Roads
City
Spring House
State/province
PA
ZIP/Postal code
19477
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (218)
Less...
More...
GSM2370970
healthy tissue 1
GSM2370971
healthy tissue 2
GSM2370972
healthy tissue 3
GSM2370973
healthy tissue 4
GSM2370974
healthy tissue 5
GSM2370975
healthy tissue 6
GSM2370976
healthy tissue 7
GSM2370977
healthy tissue 8
GSM2370978
healthy tissue 9
GSM2370979
healthy tissue 10
GSM2370980
healthy tissue 11
GSM2370981
healthy tissue 12
GSM2370982
healthy tissue 13
GSM2370983
healthy tissue 14
GSM2370984
healthy tissue 15
GSM2370985
healthy tissue 16
GSM2370986
healthy tissue 17
GSM2370987
healthy tissue 18
GSM2370988
healthy tissue 19
GSM2370989
healthy tissue 20
GSM2370990
healthy tissue 21
GSM2370991
healthy tissue 22
GSM2370992
healthy tissue 23
GSM2370993
healthy tissue 24
GSM2370994
healthy tissue 25
GSM2370995
healthy tissue 26
GSM2370996
healthy tissue 27
GSM2370997
healthy tissue 28
GSM2370998
osteoarthritis tissue 1
GSM2370999
osteoarthritis tissue 2
GSM2371000
osteoarthritis tissue 3
GSM2371001
osteoarthritis tissue 4
GSM2371002
osteoarthritis tissue 5
GSM2371003
osteoarthritis tissue 6
GSM2371004
osteoarthritis tissue 7
GSM2371005
osteoarthritis tissue 8
GSM2371006
osteoarthritis tissue 9
GSM2371007
osteoarthritis tissue 10
GSM2371008
osteoarthritis tissue 11
GSM2371009
osteoarthritis tissue 12
GSM2371010
osteoarthritis tissue 13
GSM2371011
osteoarthritis tissue 14
GSM2371012
osteoarthritis tissue 15
GSM2371013
osteoarthritis tissue 16
GSM2371014
osteoarthritis tissue 17
GSM2371015
osteoarthritis tissue 18
GSM2371016
osteoarthritis tissue 19
GSM2371017
osteoarthritis tissue 20
GSM2371018
osteoarthritis tissue 21
GSM2371019
osteoarthritis tissue 22
GSM2371020
arthralgia tissue 1
GSM2371021
arthralgia tissue 2
GSM2371022
arthralgia tissue 3
GSM2371023
arthralgia tissue 4
GSM2371024
arthralgia tissue 5
GSM2371025
arthralgia tissue 6
GSM2371026
arthralgia tissue 7
GSM2371027
arthralgia tissue 8
GSM2371028
arthralgia tissue 9
GSM2371029
arthralgia tissue 10
GSM2371030
undifferentiated arthritis tissue 1
GSM2371031
undifferentiated arthritis tissue 2
GSM2371032
undifferentiated arthritis tissue 3
GSM2371033
undifferentiated arthritis tissue 4
GSM2371034
undifferentiated arthritis tissue 5
GSM2371035
undifferentiated arthritis tissue 6
GSM2371036
rheumatoid arthritis tissue 1
GSM2371037
rheumatoid arthritis tissue 2
GSM2371038
rheumatoid arthritis tissue 3
GSM2371039
rheumatoid arthritis tissue 4
GSM2371040
rheumatoid arthritis tissue 5
GSM2371041
rheumatoid arthritis tissue 6
GSM2371042
rheumatoid arthritis tissue 7
GSM2371043
rheumatoid arthritis tissue 8
GSM2371044
rheumatoid arthritis tissue 9
GSM2371045
rheumatoid arthritis tissue 10
GSM2371046
rheumatoid arthritis tissue 11
GSM2371047
rheumatoid arthritis tissue 12
GSM2371048
rheumatoid arthritis tissue 13
GSM2371049
rheumatoid arthritis tissue 14
GSM2371050
rheumatoid arthritis tissue 15
GSM2371051
rheumatoid arthritis tissue 16
GSM2371052
rheumatoid arthritis tissue 17
GSM2371053
rheumatoid arthritis tissue 18
GSM2371054
rheumatoid arthritis tissue 19
GSM2371055
rheumatoid arthritis tissue 20
GSM2371056
rheumatoid arthritis tissue 21
GSM2371057
rheumatoid arthritis tissue 22
GSM2371058
rheumatoid arthritis tissue 23
GSM2371059
rheumatoid arthritis tissue 24
GSM2371060
rheumatoid arthritis tissue 25
GSM2371061
rheumatoid arthritis tissue 26
GSM2371062
rheumatoid arthritis tissue 27
GSM2371063
rheumatoid arthritis tissue 28
GSM2371064
rheumatoid arthritis tissue 29
GSM2371065
rheumatoid arthritis tissue 30
GSM2371066
rheumatoid arthritis tissue 31
GSM2371067
rheumatoid arthritis tissue 32
GSM2371068
rheumatoid arthritis tissue 33
GSM2371069
rheumatoid arthritis tissue 34
GSM2371070
rheumatoid arthritis tissue 35
GSM2371071
rheumatoid arthritis tissue 36
GSM2371072
rheumatoid arthritis tissue 37
GSM2371073
rheumatoid arthritis tissue 38
GSM2371074
rheumatoid arthritis tissue 39
GSM2371075
rheumatoid arthritis tissue 40
GSM2371076
rheumatoid arthritis tissue 41
GSM2371077
rheumatoid arthritis tissue 42
GSM2371078
rheumatoid arthritis tissue 43
GSM2371079
rheumatoid arthritis tissue 44
GSM2371080
rheumatoid arthritis tissue 45
GSM2371081
rheumatoid arthritis tissue 46
GSM2371082
rheumatoid arthritis tissue 47
GSM2371083
rheumatoid arthritis tissue 48
GSM2371084
rheumatoid arthritis tissue 49
GSM2371085
rheumatoid arthritis tissue 50
GSM2371086
rheumatoid arthritis tissue 51
GSM2371087
rheumatoid arthritis tissue 52
GSM2371088
rheumatoid arthritis tissue 53
GSM2371089
rheumatoid arthritis tissue 54
GSM2371090
rheumatoid arthritis tissue 55
GSM2371091
rheumatoid arthritis tissue 56
GSM2371092
rheumatoid arthritis tissue 57
GSM2371093
rheumatoid arthritis tissue 58
GSM2371094
rheumatoid arthritis tissue 59
GSM2371095
rheumatoid arthritis tissue 60
GSM2371096
rheumatoid arthritis tissue 61
GSM2371097
rheumatoid arthritis tissue 62
GSM2371098
rheumatoid arthritis tissue 63
GSM2371099
rheumatoid arthritis tissue 64
GSM2371100
rheumatoid arthritis tissue 65
GSM2371101
rheumatoid arthritis tissue 66
GSM2371102
rheumatoid arthritis tissue 67
GSM2371103
rheumatoid arthritis tissue 68
GSM2371104
rheumatoid arthritis tissue 69
GSM2371105
rheumatoid arthritis tissue 70
GSM2371106
rheumatoid arthritis tissue 71
GSM2371107
rheumatoid arthritis tissue 72
GSM2371108
rheumatoid arthritis tissue 73
GSM2371109
rheumatoid arthritis tissue 74
GSM2371110
rheumatoid arthritis tissue 75
GSM2371111
rheumatoid arthritis tissue 76
GSM2371112
rheumatoid arthritis tissue 77
GSM2371113
rheumatoid arthritis tissue 78
GSM2371114
rheumatoid arthritis tissue 79
GSM2371115
rheumatoid arthritis tissue 80
GSM2371116
rheumatoid arthritis tissue 81
GSM2371117
rheumatoid arthritis tissue 82
GSM2371118
rheumatoid arthritis tissue 83
GSM2371119
rheumatoid arthritis tissue 84
GSM2371120
rheumatoid arthritis tissue 85
GSM2371121
rheumatoid arthritis tissue 86
GSM2371122
rheumatoid arthritis tissue 87
GSM2371123
rheumatoid arthritis tissue 88
GSM2371124
rheumatoid arthritis tissue 89
GSM2371125
rheumatoid arthritis tissue 90
GSM2371126
rheumatoid arthritis tissue 91
GSM2371127
rheumatoid arthritis tissue 92
GSM2371128
rheumatoid arthritis tissue 93
GSM2371129
rheumatoid arthritis tissue 94
GSM2371130
rheumatoid arthritis tissue 95
GSM2371131
rheumatoid arthritis tissue 96
GSM2371132
rheumatoid arthritis tissue 97
GSM2371133
rheumatoid arthritis tissue 98
GSM2371134
rheumatoid arthritis tissue 99
GSM2371135
rheumatoid arthritis tissue 100
GSM2371136
rheumatoid arthritis tissue 101
GSM2371137
rheumatoid arthritis tissue 102
GSM2371138
rheumatoid arthritis tissue 103
GSM2371139
rheumatoid arthritis tissue 104
GSM2371140
rheumatoid arthritis tissue 105
GSM2371141
rheumatoid arthritis tissue 106
GSM2371142
rheumatoid arthritis tissue 107
GSM2371143
rheumatoid arthritis tissue 108
GSM2371144
rheumatoid arthritis tissue 109
GSM2371145
rheumatoid arthritis tissue 110
GSM2371146
rheumatoid arthritis tissue 111
GSM2371147
rheumatoid arthritis tissue 112
GSM2371148
rheumatoid arthritis tissue 113
GSM2371149
rheumatoid arthritis tissue 114
GSM2371150
rheumatoid arthritis tissue 115
GSM2371151
rheumatoid arthritis tissue 116
GSM2371152
rheumatoid arthritis tissue 117
GSM2371153
rheumatoid arthritis tissue 118
GSM2371154
rheumatoid arthritis tissue 119
GSM2371155
rheumatoid arthritis tissue 120
GSM2371156
rheumatoid arthritis tissue 121
GSM2371157
rheumatoid arthritis tissue 122
GSM2371158
rheumatoid arthritis tissue 123
GSM2371159
rheumatoid arthritis tissue 124
GSM2371160
rheumatoid arthritis tissue 125
GSM2371161
rheumatoid arthritis tissue 126
GSM2371162
rheumatoid arthritis tissue 127
GSM2371163
rheumatoid arthritis tissue 128
GSM2371164
rheumatoid arthritis tissue 129
GSM2371165
rheumatoid arthritis tissue 130
GSM2371166
rheumatoid arthritis tissue 131
GSM2371167
rheumatoid arthritis tissue 132
GSM2371168
rheumatoid arthritis tissue 133
GSM2371169
rheumatoid arthritis tissue 134
GSM2371170
rheumatoid arthritis tissue 135
GSM2371171
rheumatoid arthritis tissue 136
GSM2371172
rheumatoid arthritis tissue 137
GSM2371173
rheumatoid arthritis tissue 138
GSM2371174
rheumatoid arthritis tissue 139
GSM2371175
rheumatoid arthritis tissue 140
GSM2371176
rheumatoid arthritis tissue 141
GSM2371177
rheumatoid arthritis tissue 142
GSM2371178
rheumatoid arthritis tissue 143
GSM2371179
rheumatoid arthritis tissue 144
GSM2371180
rheumatoid arthritis tissue 145
GSM2371181
rheumatoid arthritis tissue 146
GSM2371182
rheumatoid arthritis tissue 147
GSM2371183
rheumatoid arthritis tissue 148
GSM2371184
rheumatoid arthritis tissue 149
GSM2371185
rheumatoid arthritis tissue 150
GSM2371186
rheumatoid arthritis tissue 151
GSM2371187
rheumatoid arthritis tissue 152
Relations
BioProject
PRJNA352076
SRA
SRP092408
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE89408_GEO_count_matrix_rename.txt.gz
8.1 Mb
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|