|
| Status |
Public on May 06, 2017 |
| Title |
Ribosome footprints sequencing from Arabidopsis thaliana roots during Pi starvation |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
Post-transcriptional gene regulation plays a significant role in the response to Pi starvation. Here, we utilized advances in next-generation sequencing technology to examine changes in transcriptional control, RNA association with translating ribosomes in 14-day-old Arabidopsis seedlings subjected to 7 days of Pi starvation.
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| |
|
| Overall design |
14 samples, 2 conditions 500uM NaH2PO4, 0uM NaH2PO4. 2 bioreplicates of 4 RNA pools (total mRNA, ribosome footprints, small RNA, double stranded RNA)
|
| |
|
| Contributor(s) |
Bazin J, Bailey-Serres J |
| Citation(s) |
29087317 |
| |
| Submission date |
May 05, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeremie Bazin |
| E-mail(s) |
jeremie.bazin@free.fr
|
| Organization name |
CNRS
|
| Lab |
Institute for Plant Sciences Paris Saclay
|
| Street address |
Bâtiment 630, rue de Noetzlin Plateau du Moulon
|
| City |
Gif Sur Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (7)
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|
| Relations |
| BioProject |
PRJNA385669 |
| SRA |
SRP106557 |
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