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Sample GSM1014619 Query DataSets for GSM1014619
Status Public on Oct 31, 2012
Title Non-Retinoblastoma serum -Replicate1
Sample type RNA
 
Source name Whole blood serum
Organism Homo sapiens
Characteristics cell type: Non-Retinoblastoma
Treatment protocol Freshly isolated whole blood serum from normal healthy individual and Retinoblastoma patients were obtained then perserved at -80 ÂșC
Extracted molecule total RNA
Extraction protocol RNA was prepared using the mirVana RNA Isolation kit(Ambion) following the manufacturer's recommendations
Label Cy3
Label protocol Cyanine-3 (Cy3) labeled cRNA was prepared using miRNA Complete Labeling and Hyb Kit(Agilent) according to the manufacturer's instructions
 
Hybridization protocol The hybridization used miRNA Complete Labeling and Hyb Kit(Agilent) according to the manufacturer's instructions
Scan protocol Slides were scanned immediately after washing on the Agilent Microarray Scanner
Data processing The scanned images were analyzed with Feature Extraction Software 10.0 (Agilent) using default parameters
 
Submission date Oct 03, 2012
Last update date Oct 31, 2012
Contact name madavan vasudevan
E-mail(s) madavan.vasudevan@gmail.com
Phone +91-9845093355
Organization name Theomics International Private Limited
Street address Kasturi Nagar
City Bangalore
State/province Karnataka
ZIP/Postal code 560043
Country India
 
Platform ID GPL14767
Series (1)
GSE41321 Differential microRNA expression profiles in Retinoblastoma serum

Data table header descriptions
ID_REF
VALUE processed Cy3 signal intensity (Agilent gProcessedSignal)

Data table
ID_REF VALUE
1 3.351104e+002
2 -2.782587e+000
3 3.057900e+002
4 -4.793286e+000
5 -3.306642e+000
6 -2.705406e+000
7 -1.158584e+000
8 -2.097860e+000
9 -3.527818e-001
10 3.086847e+001
11 -2.313406e+000
12 -2.970208e+000
13 -5.360892e+000
14 -4.584643e+000
15 5.803723e+000
16 -1.580656e+000
17 -4.345420e+000
18 -6.131783e+000
19 4.882974e+001
20 -6.438831e+000

Total number of rows: 15739

Table truncated, full table size 301 Kbytes.




Supplementary file Size Download File type/resource
GSM1014619_US90403632_252182715127_S01_miRNA_107_Sep09_1_1.txt.gz 2.2 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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